Evidence map›Paper›PMID 30063768›Full record

ArticlePloS one2018

Investigations on the mode of action of gephyronic acid, an inhibitor of eukaryotic protein translation from myxobacteria.

Yazh Muthukumar, Johanna Münkemer, Daniel Mathieu, Christian Richter, Harald Schwalbe, Heinrich Steinmetz, Wolfgang Kessler, Joachim Reichelt, Ulrike Beutling, Ronald Frank and 6 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 2 countries.

Yazh MuthukumarDepartment of Chemical Biology, Helmholtz Centre for Infection Research, Braunschweig, Germany.
Johanna MünkemerInstitut für Organische Chemie, Universität Stuttgart, Stuttgart, Germany.
Daniel MathieuZentrum für Biomolekulare Magnetische Resonanz, Universität Frankfurt, Frankfurt, Germany.
Christian RichterZentrum für Biomolekulare Magnetische Resonanz, Universität Frankfurt, Frankfurt, Germany.
Harald SchwalbeZentrum für Biomolekulare Magnetische Resonanz, Universität Frankfurt, Frankfurt, Germany.
Heinrich SteinmetzDepartment of Microbial Drugs, Helmholtz Centre for Infection Research, Braunschweig, Germany.
Wolfgang KesslerDepartment of Microbial Drugs, Helmholtz Centre for Infection Research, Braunschweig, Germany.
Joachim ReicheltDepartment of Structure and Function of Proteins, Helmholtz Centre for Infection Research, Braunschweig, Germany.ORCID 0000-0002-7822-0703
Ulrike BeutlingDepartment of Chemical Biology, Helmholtz Centre for Infection Research, Braunschweig, Germany.
Ronald FrankDepartment of Chemical Biology, Helmholtz Centre for Infection Research, Braunschweig, Germany.
Konrad BüssowDepartment of Structure and Function of Proteins, Helmholtz Centre for Infection Research, Braunschweig, Germany.
Joop van den HeuvelDepartment of Structure and Function of Proteins, Helmholtz Centre for Infection Research, Braunschweig, Germany.
Mark BrönstrupDepartment of Chemical Biology, Helmholtz Centre for Infection Research, Braunschweig, Germany.
Richard E TaylorDepartment of Chemistry & Biochemistry, University of Notre Dame, Notre Dame, Indiana, United States of America.
Sabine LaschatInstitut für Organische Chemie, Universität Stuttgart, Stuttgart, Germany.
Florenz SasseDepartment of Chemical Biology, Helmholtz Centre for Infection Research, Braunschweig, Germany.ORCID 0000-0002-6437-7742
Helmholtz Centre for Infection Research · DEGoethe University Frankfurt · DEUniversity of Stuttgart · DEUniversity of Notre Dame · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The identification of inhibitors of eukaryotic protein biosynthesis, which are targeting single translation factors, is highly demanded. Here we report on a small molecule inhibitor, gephyronic acid, isolated from the myxobacterium Archangium gephyra that inhibits growth of transformed mammalian cell lines in the nM range. In direct comparison, primary human fibroblasts were shown to be less sensitive to toxic effects of gephyronic acid than cancer-derived cells. Gephyronic acid is targeting the protein translation system. Experiments with IRES dual luciferase reporter assays identified it as an inhibitor of the translation initiation. DARTs approaches, co-localization studies and pull-down assays indicate that the binding partner could be the eukaryotic initiation factor 2 subunit alpha (eIF2α). Gephyronic acid seems to have a different mode of action than the structurally related polyketides tedanolide, myriaporone, and pederin and is a valuable tool for investigating the eukaryotic translation system. Because cancer derived cells were found to be especially sensitive, gephyronic acid could potentially find use as a drug candidate.

Indexed as

Eukaryotic Initiation Factor-2Fatty Acids, MonounsaturatedGene Expression Regulation, BacterialMicrobiological TechniquesMyxococcalesProtein BiosynthesisProtein Processing, Post-TranslationalSignal TransductionEukaryotic Initiation Factor-2Fatty Acids, Monounsaturatedgephyronic acid

Identifiers

PMID30063768
PMCPMC6067752
OpenAlexW2885752281

What OpenQuestion holds

Textmetadata
LicenceCC0
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.