Evidence map›Paper›PMID 30063105›Full record

ArticleAmerican journal of medical genetics. Part A2018

Characterization of a severe case of PIK3CA-related overgrowth at autopsy by droplet digital polymerase chain reaction and report of PIK3CA sequencing in 22 patients.

Andrew M Piacitelli, Dana M Jensen, Heather Brandling-Bennett, Megan Mariner Gray, Maneesh Batra, Juliane Gust, Ameet Thaker, Catherine Paschal, Karen Tsuchiya, Colin C Pritchard and 3 more

Open access · greenAbstract readCase Reports
In one paragraph

Article in American journal of medical genetics. Part A, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 25 citations in OpenAlex.

  1. Pooled it
  2. Detection ofBiomolecules · 2021
    Trial
  3. Article
  4. Article
  5. RecurrentCurrent issues in molecular biology · 2023
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. PIK3CA mutations in lipomatosis of nerve with or without nerve territory overgrowth.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2020
    Article
  12. Genetic approaches to metabolic bone diseases.British journal of clinical pharmacology · 2019
    Review
  13. A girl with CLOVES syndrome with a recurrentHuman genome variation · 2019
    Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Andrew M PiacitelliCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, Washington.
Dana M JensenCenter for Developmental Biology and Regenerative Medicine, Seattle Children's Research Institute, Seattle, Washington.
Heather Brandling-BennettDepartment of Pediatrics, Division of Dermatology, Seattle Children's Hospital, Seattle, Washington.
Megan Mariner GrayDepartment of Pediatrics, Division of Neonatology, University of Washington, Seattle, Washington.
Maneesh BatraDepartment of Pediatrics, Division of Neonatology, University of Washington, Seattle, Washington.
Juliane GustCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, Washington.
Ameet ThakerDepartment of Pathology, Children's Medical Center of Dallas, University of Texas Southwestern Medical Center, Dallas, Texas.ORCID 0000-0002-3901-8553
Catherine PaschalDepartment of Laboratories, Seattle Children's Hospital, Seattle, Washington.ORCID 0000-0002-9400-5560
Karen TsuchiyaDepartment of Laboratories, Seattle Children's Hospital, Seattle, Washington.ORCID 0000-0003-1406-5000
Colin C PritchardDepartment of Laboratory Medicine, University of Washington, Seattle, Washington.
Jonathan PerkinsDivision of Pediatric Otolaryngology, Seattle Children's Hospital, Department of Otolaryngology/Head and Neck Surgery, University of Washington, Seattle, Washington.
Ghayda M MirzaaCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, Washington.ORCID 0000-0003-2648-7657
James T BennettCenter for Developmental Biology and Regenerative Medicine, Seattle Children's Research Institute, Seattle, Washington.ORCID 0000-0003-2843-5594
Seattle Children's Hospital · USUniversity of Washington · USChildren's Medical Center · USSeattle Children's Hospital · US

Funding

Mosaic: post-zygotic mutations in vascular malformationsR01HL130996 · NHLBI · SEATTLE CHILDREN'S HOSPITAL · PI BENNETT, JAMES T · 2016 to 2024
$7.5M
Megalencephaly and segmental brain overgrowth in humansR01NS092772 · NINDS · SEATTLE CHILDREN'S HOSPITAL · PI MILLEN, KATHLEEN JOYCE · 2015 to 2019
$3.3M
Genes and pathways underlying brain overgrowth and focal cortical malformationsK08NS092898 · NINDS · SEATTLE CHILDREN'S HOSPITAL · PI MIRZAA, GHAYDA · 2015 to 2019
$930k
NHLBI NIH HHS R01 HL130996NINDS NIH HHS K08 NS092898NINDS NIH HHS R01 NS092772
6 · The paper itself

Abstract

PIK3CA-related overgrowth spectrum (PROS) refers to a group of disorders of segmental overgrowth of a wide variety of tissues as well as venous and lymphatic malformations. Clinical and molecular diagnosis can be challenging due to phenotypic heterogeneity and difficulties detecting low-level mosaicism using standard methods. Here, we report a patient with a severe presentation of PIK3CA-related overgrowth with analysis of 27 posthumously collected tissues by droplet digital polymerase chain reaction (PCR) at autopsy. This patient had a complicated medical course, with coagulopathy, ischemic brain injury, and sepsis resulting in multi-organ failure and death at age 2 months despite sirolimus therapy. Five of the 27 tissues analyzed possessed a mosaic PIK3CA mutation (p.E545K), with mutation levels ranging from 3 to 20% across affected tissues. We found no correlation between tissue-specific disease severity and mutation levels, likely reflecting sampling limitations. We also tested a series of 22 individuals with somatic overgrowth and/or vascular-lymphatic malformations using a targeted next generation sequencing panel and found PIK3CA mutations in nine individuals, identifying three novel PIK3CA variants. This report expands the clinical and molecular spectrum of PROS, emphasizes that different molecular methods can be complimentary in the diagnosis of these disorders, and highlights the risk of coagulopathy in a subset of patients with PIK3CA-related overgrowth.

Indexed as

Research ReportAbnormalities, MultipleAllelesAutopsyClass I Phosphatidylinositol 3-KinasesCohort StudiesHigh-Throughput Nucleotide SequencingHumansMutationPolymerase Chain ReactionVascular MalformationsClass I Phosphatidylinositol 3-KinasesPIK3CA protein, humanddPCRmosaicismovergrowthPIK3CAvascular malformation

Identifiers

PMID30063105
PMCPMC6290925
OpenAlexW2887984148

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.