Evidence map›Paper›PMID 30062819›Full record

ArticleBrain pathology (Zurich, Switzerland)2018

TREX1 is expressed by microglia in normal human brain and increases in regions affected by ischemia.

Parul H Kothari, Grant R Kolar, Joanna C Jen, Rula Hajj-Ali, Paula Bertram, Robert E Schmidt, John P Atkinson

Open access · hybridAbstract read
In one paragraph

Article in Brain pathology (Zurich, Switzerland), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Parul H KothariDepartment of Biology and Biomedical Sciences Human & Statistical Genetics Program, Washington University School of Medicine, St. Louis, MO.
Grant R KolarDepartment of Pathology & Immunology, Washington University School of Medicine, St. Louis, MO.
Joanna C JenDepartments of Neurology and Neurobiology, UCLA School of Medicine, Los Angeles, CA.
Rula Hajj-AliCenter for Vasculitis Care and Research, Cleveland Clinic Lerner College of Medicine, Orthopaedic and Rheumatologic Institute, Cleveland, OH.
Paula BertramDepartment of Medicine, Division of Rheumatology, Washington University School of Medicine, St. Louis, MO.
Robert E SchmidtDepartment of Pathology and Immunology, Division of Neuropathology, Washington University School of Medicine, St. Louis, MO.
John P AtkinsonDepartment of Medicine, Division of Rheumatology, Washington University School of Medicine, St. Louis, MO.
Washington University in St. Louis · USBrigham and Women's Hospital · USCleveland Clinic Lerner College of Medicine · USIcahn School of Medicine at Mount Sinai · USSaint Louis University · US

Funding

Pre-doctoral Research Training in Human Genetic EpidemiologyT32HL083822 · NHLBI · WASHINGTON UNIVERSITY · PI PROVINCE, MICHAEL A. · 2008 to 2012
$1.2M
Pathobiology of Retinal Vasculopathy with Cerebal Leukodystrophy (RVCL)R01NS062069 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JEN, JOANNA C · 2009 to 2010
$1.1M
NHLBI NIH HHS T32 HL083822NINDS NIH HHS R01 NS062069
6 · The paper itself

Abstract

backgroundMutations in the three-prime repair exonuclease 1 (TREX1) gene have been associated with neurological diseases, including Retinal Vasculopathy with Cerebral Leukoencephalopathy (RVCL). However, the endogenous expression of TREX1 in human brain has not been studied.

methodsWe produced a rabbit polyclonal antibody (pAb) to TREX1 to characterize TREX1 by Western blotting (WB) of cell lysates from normal controls and subjects carrying an RVCL frame-shift mutation. Dual staining was performed to determine cell types expressing TREX1 in human brain tissue. TREX1 distribution in human brain was further evaluated by immunohistochemical analyses of formalin-fixed, paraffin-embedded samples from normal controls and patients with RVCL and ischemic stroke.

resultsAfter validating the specificity of our anti-TREX1 rabbit pAb, WB analysis was utilized to detect the endogenous wild-type and frame-shift mutant of TREX1 in cell lysates. Dual staining in human brain tissues from patients with RVCL and normal controls localized TREX1 to a subset of microglia and macrophages. Quantification of immunohistochemical staining of the cerebral cortex revealed that TREX1

conclusionsTREX1 is expressed by a subset of microglia in normal human brain, often in close proximity to the microvasculature, and increases in the setting of ischemic lesions. These findings suggest a role for TREX1

Indexed as

AgedAnimalsAntibodiesBrainBrain IschemiaExodeoxyribonucleasesFemaleFrameshift MutationHEK293 CellsHeLa CellsHereditary Central Nervous System Demyelinating DiseasesHomeostasisHumansMacrophagesMaleMicrogliaAntibodiesExodeoxyribonucleasesPhosphoproteinsthree prime repair exonuclease 1brain ischemiaDNase1macrophagesmicrogliaTREX1vasculopathy

Identifiers

PMID30062819
PMCPMC6404532
OpenAlexW2887030509

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.