Evidence map›Paper›PMID 30062672›Full record

ArticleMolecular neurobiology2019

Dissecting Brain Networks Underlying Alcohol Binge Drinking Using a Systems Genomics Approach.

Laura B Ferguson, Lingling Zhang, Daniel Kircher, Shi Wang, R Dayne Mayfield, John C Crabbe, Richard A Morrisett, R Adron Harris, Igor Ponomarev

Open access · hybridAbstract read
In one paragraph

Article in Molecular neurobiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 41 citations in OpenAlex.

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  15. Neurobiological Bases of Alcohol Consumption After Social Stress.Current topics in behavioral neurosciences · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Laura B FergusonThe Waggoner Center for Alcohol and Addiction Research, The University of Texas at Austin, Austin, TX, USA.ORCID http://orcid.org/0000-0003-3274-412X
Lingling ZhangThe Waggoner Center for Alcohol and Addiction Research, The University of Texas at Austin, Austin, TX, USA.
Daniel KircherThe Waggoner Center for Alcohol and Addiction Research, The University of Texas at Austin, Austin, TX, USA.
Shi WangThe Waggoner Center for Alcohol and Addiction Research, The University of Texas at Austin, Austin, TX, USA.
R Dayne MayfieldThe Waggoner Center for Alcohol and Addiction Research, The University of Texas at Austin, Austin, TX, USA.
John C CrabbePortland Alcohol Research Center, VA Portland Health Care System, Portland, OR, USA.
Richard A MorrisettThe Waggoner Center for Alcohol and Addiction Research, The University of Texas at Austin, Austin, TX, USA.
R Adron HarrisThe Waggoner Center for Alcohol and Addiction Research, The University of Texas at Austin, Austin, TX, USA.
Igor PonomarevThe Waggoner Center for Alcohol and Addiction Research, The University of Texas at Austin, Austin, TX, USA. ponomarev@utexas.edu.
The University of Texas at Austin · USOregon Health & Science University · US

Funding

Translational measures of risk for excessive alcohol consumptionP60AA010760 · NIAAA · OREGON HEALTH & SCIENCE UNIVERSITY · PI Suzanne S. Fei · 2006 to 2026
$34.5M
Integrative Neuroscience Initiative on Alcoholism - West - SupplementU01AA013517 · NIAAA · SCRIPPS RESEARCH INSTITUTE, THE · PI ROBERTO, MARISA · 2001 to 2014
$12.7M
Selective Breeding for Drinking in the Circadian DarkU01AA013519 · NIAAA · OREGON HEALTH & SCIENCE UNIVERSITY · PI Angela Renee Ozburn · 2001 to 2026
$10.9M
GENE EXPRESSION IN THE HUMAN ALCOHOLIC BRAINR01AA012404 · NIAAA · UNIVERSITY OF TEXAS AUSTIN · PI MAYFIELD, ROY DAYNE · 2000 to 2025
$10.7M
Neurochemical & Behavioral Correlates of ETOH EffectsT32AA007471 · NIAAA · UNIVERSITY OF TEXAS AUSTIN · PI Kimberly Nixon · 1987 to 2026
$9.2M
Next Generation Sequencing of Human Alcoholic BrainU01AA020926 · NIAAA · UNIVERSITY OF TEXAS AT AUSTIN · PI Roy DAYNE MAYFIELD · 2011 to 2026
$6.7M
Novel molecular and cellular approaches for alcoholism medication developmentP01AA020683 · NIAAA · UNIVERSITY OF TEXAS AT AUSTIN · PI MIHIC, S JOHN · 2012 to 2016
$3.3M
Ethanol, Dependence and Mesolimbic PlasticityR01AA015167 · NIAAA · UNIVERSITY OF TEXAS AUSTIN · PI MANGIERI, REGINA A. · 2005 to 2015
$2.3M
Target Validation Electrophysiology CoreU24AA016651 · NIAAA · UNIVERSITY OF TEXAS AT AUSTIN · PI MANGIERI, REGINA A. · 2015 to 2021
$1.7M
Integrative Neuroscience Initiative on AlcoholismU24AA013517 · NIAAA · SCRIPPS RESEARCH INSTITUTE, THE · PI ROBERTO, MARISA · 2015 to 2016
$1.5M
Alcohol-responsive protein networks underlying excessive ethanol consumptionU01AA016648 · NIAAA · UNIVERSITY OF TEXAS AT AUSTIN · PI MAYFIELD, R. DAYNE · 2006 to 2010
$776k
Molecular Mechanisms of Cellular Plasticity in a Mouse Model of Excessive AlcoholK01AA017234 · NIAAA · UNIVERSITY OF TEXAS AT AUSTIN · PI PONOMAREV, IGOR · 2008 to 2012
$700k
BLRD VA I01 BX000313NIAAA NIH HHS AA012404NIAAA NIH HHS AA013517NIAAA NIH HHS AA013519NIAAA NIH HHS AA016648NIAAA NIH HHS AA017234NIAAA NIH HHS AA020683NIAAA NIH HHS AA020926NIAAA NIH HHS AA024332NIAAA NIH HHS F31 AA024332NIAAA NIH HHS K01 AA017234NIAAA NIH HHS P01 AA020683NIAAA NIH HHS P60 AA010760NIAAA NIH HHS R01 AA012404NIAAA NIH HHS R01 AA015167NIAAA NIH HHS T32 AA007471NIAAA NIH HHS U01 AA013517NIAAA NIH HHS U01 AA013519NIAAA NIH HHS U01 AA016648NIAAA NIH HHS U01 AA020926NIAAA NIH HHS U24 AA013517NIAAA NIH HHS U24 AA016651U.S. Department of Veterans Affairs BX000313
6 · The paper itself

Abstract

Alcohol use disorder (AUD) is a complex psychiatric disorder with strong genetic and environmental risk factors. We studied the molecular perturbations underlying risky drinking behavior by measuring transcriptome changes across the neurocircuitry of addiction in a genetic mouse model of binge drinking. Sixteen generations of selective breeding for high blood alcohol levels after a binge drinking session produced global changes in brain gene expression in alcohol-naïve High Drinking in the Dark (HDID-1) mice. Using gene expression profiles to generate circuit-level hypotheses, we developed a systems approach that integrated regulation of gene coexpression networks across multiple brain regions, neuron-specific transcriptional signatures, and knowledgebase analytics. Whole-cell, voltage-clamp recordings from nucleus accumbens shell neurons projecting to the ventral tegmental area showed differential ethanol-induced plasticity in HDID-1 and control mice and provided support for one of the hypotheses. There were similarities in gene networks between HDID-1 mouse brains and postmortem brains of human alcoholics, suggesting that some gene expression patterns associated with high alcohol consumption are conserved across species. This study demonstrated the value of gene networks for data integration across biological modalities and species to study mechanisms of disease.

Indexed as

Gene Regulatory NetworksGenomicsSystems BiologyAnimalsBinge DrinkingBrainGene Expression RegulationHumansMiceMolecular Sequence AnnotationNeuronal PlasticityTranscriptomeBinge drinkingGene expressionGene networksHDID miceTranscriptome

Identifiers

PMID30062672
PMCPMC6459809
OpenAlexW2887416739

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.