ArticleInfection and immunity2018
Genome Plasticity of
Open access · hybridAbstract read
In one paragraph
Article in Infection and immunity, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.
0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
4.5field-weighted citation impact, top 4% of its field
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
42 citing papers in PubMed, 60 citations in OpenAlex.
- How do immunometabolites shape bacterial infections?PLoS biology · 2026Article
- Methicillin-Resistant Staphylococcus aureus Bacteremia Relapses Show Diverse Genomic Profiles but Convergence in Bacteremia-Associated Genes.The Journal of infectious diseases · 2025Article
- Prophage-encoded methyltransferase drives adaptation of community-acquired methicillin-resistant Staphylococcus aureus.The Journal of clinical investigation · 2025Article
- Review
- The ability ofInfection and immunity · 2025Article
- Forssman and the staphylococcal hemolysins.APMIS : acta pathologica, microbiologica, et immunologica Scandinavica · 2025Review
- The Epistemology of Bacterial Virulence Factor Characterization.Microorganisms · 2024Review
- The role of Staphylococcus aureus quorum sensing in cutaneous and systemic infections.Inflammation and regeneration · 2024Review
- Airway environment drives the selection of quorum sensing mutants and promote Staphylococcus aureus chronic lifestyle.Nature communications · 2023Article
- The intra-host evolutionary landscape and pathoadaptation of persistentMicrobial genomics · 2023Article
- Bacterial-fungal interactions promote parallel evolution of global transcriptional regulators in a widespread Staphylococcus species.The ISME journal · 2023Article
- Quorum-sensing, intra- and inter-species competition in the staphylococci.Microbiology (Reading, England) · 2023Review
- Article
- Staphylococcus aureus host interactions and adaptation.Nature reviews. Microbiology · 2023Review
- The Type 7b Secretion System of S. aureus and Its Role in Colonization and Systemic Infection.Infection and immunity · 2023Article
- MRSA lineage USA300 isolated from bloodstream infections exhibit altered virulence regulation.Cell host & microbe · 2023Article
- Evaluation of within-host evolution of methicillin-resistant Staphylococcus aureus (MRSA) by comparing cgMLST and SNP analysis approaches.Scientific reports · 2022Article
- Article
- Proteomic Comparison of Ivermectin Sensitive and ResistantAntibiotics (Basel, Switzerland) · 2022Article
- Convergent Evolution of Antibiotic Tolerance in Patients with Persistent Methicillin-Resistant Staphylococcus aureus Bacteremia.Infection and immunity · 2022Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
20 authors at 3 institutions in 1 country.
Deena R Altman *Department of Medicine, Division of Infectious Diseases, Icahn School of Medicine at Mount Sinai, New York City, New York, USA.ORCID https://orcid.org/0000-0003-1948-3834
Mitchell J Sullivan *Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York City, New York, USA.
Kieran I ChackoDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York City, New York, USA.
Divya BalasubramanianDepartment of Microbiology, New York University School of Medicine, New York, New York, USA.
Theodore R PakDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York City, New York, USA.ORCID https://orcid.org/0000-0002-1676-2523
William E SauseDepartment of Microbiology, New York University School of Medicine, New York, New York, USA.
Krishan KumarDepartment of Medicine, Division of Infectious Diseases, New York University School of Medicine, New York, New York, USA.
Robert SebraDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York City, New York, USA.
Gintaras DeikusDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York City, New York, USA.
Oliver AttieDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York City, New York, USA.
Hannah RoseDepartment of Medicine, Division of Infectious Diseases, New York University School of Medicine, New York, New York, USA.
Martha LewisDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York City, New York, USA.
Yi FulmerDepartment of Medicine, Division of Infectious Diseases, New York University School of Medicine, New York, New York, USA.
Ali BashirDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York City, New York, USA.
Andrew KasarskisDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York City, New York, USA.
Eric E SchadtDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York City, New York, USA.
Anthony R RichardsonDepartment of Microbiology and Molecular Genetics, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Victor J TorresDepartment of Microbiology, New York University School of Medicine, New York, New York, USA.
Bo Shopsin *Department of Microbiology, New York University School of Medicine, New York, New York, USA Bo.Shopsin@med.nyu.edu harm.vanbakel@mssm.edu.
Harm van Bakel *Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York City, New York, USA Bo.Shopsin@med.nyu.edu harm.vanbakel@mssm.edu.ORCID https://orcid.org/0000-0002-1376-6916
Icahn School of Medicine at Mount Sinai · USNew York University · USUniversity of Pittsburgh · US
Funding
TRAINING PROGRAM: MECHANISMS OF VIRUS-HOST INTERACTIONST32AI007647 · NIAID · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI Domenico Tortorella · 2000 to 2026
$11.5MINFECTIOUS DISEASES &BASIC MICROBIOLOGICAL MECHANISMST32AI007180 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI WEISER, JEFFREY NEAL · 1985 to 2022
$8.9MInvestigating genomic factors and microbiome features that impact CDI transmission and prognosisR01AI119145 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI BASHIR, ALI M, VAN BAKEL, HARM · 2015 to 2019
$4.2MMSHS Translational Science HubKL2TR001435 · NCATS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI MOSKOWITZ, ALAN J · 2015 to 2019
$3.8MThe Role of Lactate in the Metabolic Evolution of Staphylococcus aureusR01AI093613 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI RICHARDSON, ANTHONY R. · 2011 to 2021
$3.6MRole of precipitous virulence in invasiveness of community-acquired methicillin-rR01AI103268 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI SHOPSIN, BO, TORRES, VICTOR J. · 2013 to 2017
$2.1MTransforming Genomics with 5 PB Big Omics Data Engine Cray CS300-AC SupercomputerS10OD018522 · OD · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KOVATCH, PATRICIA · 2014 to 2014
$1.9MMultiscale analysis of immune profiling data from dengue and chikungunya virus infections in humansF30AI122673 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI PAK, THEODORE ROBERTSON · 2016 to 2018
$132kNCATS NIH HHS KL2 TR001435NIAID NIH HHS F30 AI122673NIAID NIH HHS HHSN272201400019CNIAID NIH HHS R01 AI093613NIAID NIH HHS R01 AI103268NIAID NIH HHS R01 AI119145NIAID NIH HHS T32 AI007180NIAID NIH HHS T32 AI007647NIH HHS S10 OD018522
Abstract
Therapy for bacteremia caused by
Indexed as
Genome, BacterialAnimalsBacteremiaBacterial ProteinsFemaleGene Expression Regulation, BacterialHumansMiceMutationPhylogenyStaphylococcal InfectionsStaphylococcus aureusTrans-ActivatorsVirulenceAgr protein, Staphylococcus aureusBacterial ProteinsTrans-Activatorsgene regulationgenome analysisStaphylococcus aureus
Identifiers
What OpenQuestion holds
Textmetadata
LicenceCC BY
Read underepoch 390
Registered trials
None linked
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.