ArticleInternational journal of molecular sciences2018
Transcriptome Analysis Reveals Multiple Hormones, Wounding and Sugar Signaling Pathways Mediate Adventitious Root Formation in Apple Rootstock.
Article in International journal of molecular sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.
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Who cites it
29 citing papers in PubMed, 101 citations in OpenAlex.
- ABT Promotes Adventitious Root Formation in Mulberry Cuttings by Coordinating Hormonal Homeostasis and Defense Priming.Current issues in molecular biology · 2026Article
- Deciphering intra-connectivity of gene network response to drought and salinity in apple.Frontiers in plant science · 2026Article
- Integrated transcriptomics and proteomics revealed that exogenous spermidine modulated signal transduction and carbohydrate metabolic pathways to enhance heat tolerance of lettuce.BMC plant biology · 2025Article
- Comparative transcriptomic and hormonal analyses reveal potential regulation networks of adventitious root formation in Metasequoia glyptostroboides Hu et Cheng.BMC genomics · 2024Article
- Modulating root system architecture: cross-talk between auxin and phytohormones.Frontiers in plant science · 2024Review
- Adventitious rooting in response to long-term cold: a possible mechanism of clonal growth in alpine perennials.Frontiers in plant science · 2024Article
- Efficient plant regeneration through direct shoot organogenesis and two-step rooting inFrontiers in plant science · 2024Article
- Uncovering early transcriptional regulation during adventitious root formation in Medicago sativa.BMC plant biology · 2023Article
- Comparative physiological, metabolomic, and transcriptomic analyses reveal mechanisms of apple dwarfing rootstock root morphogenesis under nitrogen and/or phosphorus deficient conditions.Frontiers in plant science · 2023Article
- Transcriptome analysis reveals that auxin promotes strigolactone-induced adventitious root growth in the hypocotyl of melon seedlings.Frontiers in plant science · 2023Article
- Comprehensive transcriptome analysis unravels the crucial genes during adventitious root development induced by carbon monoxide in Cucumis sativus L.Molecular biology reports · 2022Article
- Transcriptome Dynamics of Rooting Zone and Leaves during In Vitro Adventitious Root Formation inPlants (Basel, Switzerland) · 2022Article
- Plant Development and Crop Yield: The Role of Gibberellins.Plants (Basel, Switzerland) · 2022Review
- Cross-Talk between Transcriptome Analysis and Physiological Characterization Identifies the Genes in Response to the Low Phosphorus Stress inInternational journal of molecular sciences · 2022Article
- Article
- Transcriptome Analysis Reveals Multiple Genes and Complex Hormonal-Mediated Interactions with PEG during Adventitious Root Formation in Apple.International journal of molecular sciences · 2022Article
- Transcriptomics and metabolomics reveal effect of arbuscular mycorrhizal fungi on growth and development of apple plants.Frontiers in plant science · 2022Article
- De novo transcriptome analysis provides insights into formation of in vitro adventitious root from leaf explants of Arnebia euchroma.BMC plant biology · 2021Article
- Transcriptome and metabolite analysis related to branch development in two genotypes of Eucalyptus urophylla.Molecular genetics and genomics : MGG · 2021Article
- Adventitious Root Formation in Tree Species.Plants (Basel, Switzerland) · 2021Article
Corrections and comments
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Authors and funding
11 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Adventitious roots (AR) play an important role in the vegetative propagation of apple rootstocks. The potential role of hormone, wounding, and sugar signalling pathways in mediating AR formation has not been adequately explored and the whole co-expression network in AR formation has not been well established in apple. In order to identify the molecular mechanisms underlying AR formation in 'T337' apple rootstocks, transcriptomic changes that occur during four stages of AR formation (0, 3, 9 and 16 days) were analyzed using high-throughput sequencing. A total of 4294 differentially expressed genes were identified. Approximately 446 genes related to hormones, wounding, sugar signaling, root development, and cell cycle induction pathways were subsequently selected based on their potential to be involved in AR formation. RT-qPCR validation of 47 genes with known functions exhibited a strong positive correlation with the RNA-seq data. Interestingly, most of the candidate genes involved in AR formation that were identified by transcriptomic sequencing showed auxin-responsive expression patterns in an exogenous Indole-3-butyric acid (IBA)-treatment assay: Indicating that endogenous and exogenous auxin plays key roles in regulating AR formation via similar signalling pathways to some extent. In general, AR formation in apple rootstocks is a complex biological process which is mainly influenced by the auxin signaling pathway. In addition, multiple hormones-, wounding- and sugar-signaling pathways interact with the auxin signaling pathway and mediate AR formation in apple rootstocks.
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