Evidence map›Paper›PMID 30059277›Full record

ArticleAutophagy2018

Importance of TFEB acetylation in control of its transcriptional activity and lysosomal function in response to histone deacetylase inhibitors.

Jianbin Zhang, Jigang Wang, Zhihong Zhou, Jung-Eun Park, Liming Wang, Shuai Wu, Xin Sun, Liqin Lu, Tianru Wang, Qingsong Lin and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Autophagy, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed, 1 pooled it
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 1 synthesis or guideline pooled it, 116 citations in OpenAlex.

  1. Guideline
  2. Review
  3. Article
  4. Tacrolimus inhibits CVB3-targeted regulation of TFEB by PPP3/calcineurin.Frontiers in cellular and infection microbiology · 2026
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Article
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  14. Article
  15. Article
  16. Mechanisms of HDACs in cancer development.Frontiers in immunology · 2025
    Review
  17. Article
  18. Article
  19. Lysosome quality control in health and neurodegenerative diseases.Cellular & molecular biology letters · 2024
    Review
  20. Review

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 4 countries.

Jianbin Zhanga Department of Oncology , Clinical Research Institute, Key Laboratory of Tumor Molecular Diagnosis and Individual Medicine of Zhejiang Province, Zhejiang Provincial People's Hospital, People's Hospital of Hangzhou Medical College , Hangzhou , China.
Jigang Wangb Department of Physiology , Yong Loo Lin School of Medicine, National University of Singapore , Singapore.
Zhihong Zhoub Department of Physiology , Yong Loo Lin School of Medicine, National University of Singapore , Singapore.
Jung-Eun Parkc Division of Chemical Biology and BioTechnology , School of Biological Sciences, Nanyang Technological University , Singapore.
Liming Wangd Department of Applied Biology and Chemical Technology , The Hong Kong Polytechnic University, Hung Hom , Kowloon , Hong Kong , China.
Shuai Wud Department of Applied Biology and Chemical Technology , The Hong Kong Polytechnic University, Hung Hom , Kowloon , Hong Kong , China.
Xin Suna Department of Oncology , Clinical Research Institute, Key Laboratory of Tumor Molecular Diagnosis and Individual Medicine of Zhejiang Province, Zhejiang Provincial People's Hospital, People's Hospital of Hangzhou Medical College , Hangzhou , China.
Liqin Lua Department of Oncology , Clinical Research Institute, Key Laboratory of Tumor Molecular Diagnosis and Individual Medicine of Zhejiang Province, Zhejiang Provincial People's Hospital, People's Hospital of Hangzhou Medical College , Hangzhou , China.
Tianru Wange Life Sciences Program, Faculty of Arts and Sciences , University of Toronto , Toronto , Canada.
Qingsong Linf Department of Biological Sciences , National University of Singapore , Singapore.
Siu Kwan Szec Division of Chemical Biology and BioTechnology , School of Biological Sciences, Nanyang Technological University , Singapore.
Dongsheng Huanga Department of Oncology , Clinical Research Institute, Key Laboratory of Tumor Molecular Diagnosis and Individual Medicine of Zhejiang Province, Zhejiang Provincial People's Hospital, People's Hospital of Hangzhou Medical College , Hangzhou , China.
Han-Ming Shenb Department of Physiology , Yong Loo Lin School of Medicine, National University of Singapore , Singapore.
National University of Singapore · SGHangzhou Medical College · CNHong Kong Polytechnic University · HKNanyang Technological University · SGUniversity of Toronto · CAZhejiang Provincial People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

TFEB (transcription factor EB) is a master regulator of lysosomal biogenesis, function and autophagy. The transcriptional activity of TFEB is mainly controlled by its phosphorylation status mediated by the MTOR (mechanistic target of rapamycin [serine/threonine kinase]) complex 1 (MTORC1). At present, little is known whether other forms of posttranslational modifications (PTMs) such as acetylation also affects is transcriptional activity. In this study, we first observed that a well-established histone deacetylase inhibitor suberoylanilide hydroxamic acid (SAHA) activated lysosomal function in human cancer cells, a process independent of the MTORC1 pathway. Second, SAHA treatment activated TFEB transcriptional activity, as evidenced by increased TFEB luciferase activity and expression of its target genes. Third and more importantly, we observed the enhanced TFEB acetylation in SAHA-treated cells, with identification of 4 acetylation sites. Mutation of these 4 sites markedly diminished TFEB transcriptional activity and lysosomal function induced by SAHA. Finally, we found that TFEB acetylation was functionally implicated in SAHA-mediated autophagy and cell death in cancer cells. Taken together, our results demonstrate that TFEB acetylation is a novel form of PTMs in TFEB that plays an important role in determining its transcriptional activity, lysosomal function and autophagy in cancer cells. ABBREVIATIONS: ACAT1: acetyl-coenzyme A acetyltransferase 1; AHA: L-azidohomoalanine; AO: acidic orange; ATG: autophagy related; CLEAR: Coordinated Lysosomal Expression and Regulation; CQ: chloroquine; CTSB: cathepsin B; HATs: histone acetyltransferases; HDACIs: HDACs inhibitors; HDACs: histone deacetylases; IP: immunoprecipitation; MEFs: mouse embryonic fibroblasts; MS: mass spectrometry; MTOR: mechanistic target of rapamycin (serine/threonine kinase); MTORC1: mechanistic target of rapamycin (serine/threonine kinase) complex 1; PTMs: posttranslational modifications; SAHA: suberoylanilidehydroxamic acid; TFEB: transcription factor EB.

Indexed as

AcetylationAnimalsAutophagyBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsCell Line, TumorCell NucleusHEK293 CellsHistone Deacetylase InhibitorsHumansLysosomesMiceTranscription, GeneticVorinostatBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsHistone Deacetylase InhibitorsTFEB protein, humanVorinostatAcetylationautophagyhistone deacetylase inhibitorslysosomeTFEB

Identifiers

PMID30059277
PMCPMC6103407
OpenAlexW2885251054

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.