Evidence map›Paper›PMID 30055800›Full record

ArticleBiochemical and biophysical research communications2018

Regulation of tankyrase activity by a catalytic domain dimer interface.

Chen Fan, Nageswari Yarravarapu, Hua Chen, Ozlem Kulak, Pranathi Dasari, Jeremiah Herbert, Kiyoshi Yamaguchi, Lawrence Lum, Xuewu Zhang

Open access · hybridAbstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Functional roles of ADP-ribosylation writers, readers and erasers.Frontiers in cell and developmental biology · 2022
    Review
  7. Review
  8. Article
  9. Article
  10. Nuclear PARPs and genome integrity.Genes & development · 2020
    Review
  11. Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Chen FanDepartment of Pharmacology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Nageswari YarravarapuDepartment of Cell Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Hua ChenDepartment of Pharmacology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Ozlem KulakDepartment of Cell Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Pranathi DasariDepartment of Pharmacology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Jeremiah HerbertDepartment of Cell Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Kiyoshi YamaguchiDivision of Clinical Genome Research, Advanced Clinical Research Center, Institute of Medical Science, University of Tokyo, Japan.
Lawrence LumDepartment of Cell Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA. Electronic address: Lawrence.lum@utsouthwestern.edu.
Xuewu ZhangDepartment of Pharmacology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA. Electronic address: Xuewu.zhang@utsouthwestern.edu.
The University of Texas Southwestern Medical Center · US

Funding

MECHANISMS OF DRUG ACTION AND DISPOSITIONT32GM007062 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI MANGELSDORF, DAVID J · 1985 to 2020
$7.4M
Chemical disruption of Wnt-mediated signal transductionR01CA168761 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI KIM, JAMES · 2013 to 2017
$2.3M
Targeting vismodegib-resistant tumors using BH3 mimeticsR01CA196851 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI KIM, JAMES · 2016 to 2020
$1.7M
NCI NIH HHS R01 CA168761NCI NIH HHS R01 CA196851NIGMS NIH HHS T32 GM007062
6 · The paper itself

Abstract

Tankyrases (TNKS and TNKS2) are enzymes that catalyze poly-ADP-ribosylation (PARsylation) of their target proteins. Tankyrase-mediated PARsylation plays critical regulatory roles in cell signaling, particularly in the Wnt/β-catenin pathway. The sterile alpha motif (SAM) domain in tankyrases mediates their oligomerization, which is essential for tankyrase function. The oligomerization regulates the catalytic activity of tankyrases, but the underlying mechanism is unclear. Our analyses of crystal structures of the tankyrase catalytic domain suggest that formation of a head-to-head dimer regulates the catalytic activity. Our activity assays show that residues in the catalytic domain dimer interface are important for the PARsylation activity of tankyrases both in solution and cells. The dimer is weak and may only form in the context of the SAM domain-mediated oligomers of tankyrases, consistent with the dependence of the tankyrase activity on the SAM domain.

Indexed as

BiocatalysisCatalytic DomainProtein MultimerizationCrystallography, X-RayHumansModels, MolecularTankyrasesTankyrasesTNKS2 protein, humanTNKS protein, humanDimerizationOligomerizationPARsylationTankyrase

Identifiers

PMID30055800
PMCPMC6132069
OpenAlexW2883433077

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.