Evidence map›Paper›PMID 30055650›Full record

ArticleBMC research notes2018

Effect of transcription terminator usage on the establishment of transgene transcriptional gene silencing.

Ana Pérez-González, Elena Caro

Open access · goldAbstract read
In one paragraph

Article in BMC research notes, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Engineering and comparison of cas12a-based genome editing systems in plants.The Plant journal : for cell and molecular biology · 2025
    Article
  3. Article
  4. bioRxiv : the preprint server for biology · 2024
    Article
  5. Article
  6. Plant terminators: the unsung heroes of gene expression.Journal of experimental botany · 2023
    Review
  7. Review
  8. Article
  9. Review
  10. Review
  11. The Whys and Wherefores of Transitivity in Plants.Frontiers in plant science · 2020
    Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Ana Pérez-GonzálezCentre for Plant Biotechnology and Genomics, Universidad Politécnica de Madrid (UPM)-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Campus Montegancedo UPM, Pozuelo de Alarcón, 28223, Madrid, Spain.
Elena CaroCentre for Plant Biotechnology and Genomics, Universidad Politécnica de Madrid (UPM)-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Campus Montegancedo UPM, Pozuelo de Alarcón, 28223, Madrid, Spain. elena.caro@upm.es.ORCID http://orcid.org/0000-0002-1034-1621
Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria · ES

Funding

Ministerio de Economía y Competitividad BIO2014-58789-PMinisterio de Economía y Competitividad RYC-2012-10367Universidad Politécnica de Madrid Contarto pre-doctoral Programa Propio-Santander Universidades
6 · The paper itself

Abstract

objectiveObtaining high and stable transgene expression is of vital importance for plant genetic engineering. A lot is known about the relationship between terminator efficiency and gene expression, but no studies have addressed the relationship between terminator usage and transgene expression stability or heritable gene silencing. In this paper, we aim to analyze if terminators are a determining factor in the establishment of promoter DNA methylation of plant transgenes.

resultsOur experiments comparing plants with a LUC reporter under the 35S CaMV promoter and good efficiency terminators (Thsp, T35S) show that the use of efficient terminator sequences does not avoid the accumulation of promoter DNA methylation and transgene silencing. However, Thsp lead to a higher reporter gene expression and lower promoter DNA methylation levels than T35S, supporting that terminator usage is indeed involved in the establishment of TGS by methylation of transgenes' promoters. In the case of a terminatorless construct, the PTGS initiated by the improperly terminated mRNAs is not followed by the establishment of heritable silencing in the form of strong promoter DNA methylation, like in the case of TAS genes and reactivated TEs (for the transgene DNA methylation levels remained below the 20%).

Indexed as

DNA MethylationGene SilencingGenes, ReporterTransgenesArabidopsisGene Expression Regulation, PlantPlants, Genetically ModifiedPromoter Regions, GeneticTranscription, GeneticArabidopsisDNA methylationPTGSRdDMSilencingTerminatorTGSTransgene

Identifiers

PMID30055650
PMCPMC6064074
OpenAlexW2884270694

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.