Evidence map›Paper›PMID 30054535›Full record

ArticleScientific reports2018

Engineered Protein Model of the ATP synthase H

Hannah E Pierson, Mandeep Kaler, Christopher O'Grady, Eva-Maria E Uhlemann, Oleg Y Dmitriev

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Mechanism of proton-powered c-ring rotation in a mitochondrial ATP synthase.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  2. Directed proton transfer from FBiophysical reviews · 2023
    Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Hannah E PiersonDepartment of Biochemistry, University of Saskatchewan, Saskatoon, Saskatchewan, Canada.
Mandeep KalerDepartment of Biochemistry, University of Saskatchewan, Saskatoon, Saskatchewan, Canada.
Christopher O'GradyDepartment of Biochemistry, University of Saskatchewan, Saskatoon, Saskatchewan, Canada.
Eva-Maria E UhlemannDepartment of Biochemistry, University of Saskatchewan, Saskatoon, Saskatchewan, Canada.
Oleg Y DmitrievDepartment of Biochemistry, University of Saskatchewan, Saskatoon, Saskatchewan, Canada. Oleg.Dmitriev@usask.ca.
University of Saskatchewan · CAJohns Hopkins Medicine · US

Funding

TR&D 3: TECHNOLOGY DEVELOPMENT FOR NMR STUDIES OF SMALL MOLECULES (METABOLOMICS, NATURAL PRODUCTS, METABOLITE-PROTEIN INTERACTIONS) pp.537-585 P41GM103399 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI MARKLEY, JOHN LUTE · 2012 to 2019
$9.4M
NIGMS NIH HHS P41 GM103399
6 · The paper itself

Abstract

ATP synthase is powered by the flow of protons through the molecular turbine composed of two α-helical integral membrane proteins, subunit a, which makes a stator, and a cylindrical rotor assembly made of multiple copies of subunit c. Transient protonation of a universally conserved carboxylate on subunit c (D61 in E. coli) gated by the electrostatic interaction with arginine on subunit a (R210 in E. coli) is believed to be a crucial step in proton transfer across the membrane. We used a fusion protein consisting of subunit a and the adjacent helices of subunit c to test by NMR spectroscopy if cD61 and aR210 are involved in an electrostatic interaction with each other, and found no evidence of such interaction. We have also determined that R140 does not form a salt bridge with either D44 or D124 as was suggested previously by mutation analysis. Our results demonstrate the potential of using arginines as NMR reporter groups for structural and functional studies of challenging membrane proteins.

Indexed as

Models, MolecularProtein EngineeringArginineAspartic AcidEscherichia coliHydrogen-Ion ConcentrationMagnetic Resonance SpectroscopyProtein SubunitsProton-Translocating ATPasesSaltsArginineAspartic AcidProtein SubunitsProton-Translocating ATPasesSalts

Identifiers

PMID30054535
PMCPMC6063947
OpenAlexW2884701921

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.