Evidence map›Paper›PMID 30054481›Full record

ArticleNature communications2018

Lipid droplet and peroxisome biogenesis occur at the same ER subdomains.

Amit S Joshi, Benjamin Nebenfuehr, Vineet Choudhary, Prasanna Satpute-Krishnan, Tim P Levine, Andy Golden, William A Prinz

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 106 papers.

0numbers the graph read from it
0cells of the map it votes in
106citing papers in PubMed
13.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

106 citing papers in PubMed, 197 citations in OpenAlex.

  1. Review
  2. Heterogeneity, dynamics and organelle interactions of lipid droplets.Nature reviews. Molecular cell biology · 2026
    Review
  3. Polyunsaturated fatty acid metabolism in the retinal pigment epithelium and its association with outer retinal disease.Mammalian genome : official journal of the International Mammalian Genome Society · 2026
    Review
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46 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Amit S JoshiNational Institute of Diabetes and Digestive and Kidney Diseases, NIH, Bethesda, MD 20892, USA. amit.joshi@nih.gov.
Benjamin NebenfuehrNational Institute of Diabetes and Digestive and Kidney Diseases, NIH, Bethesda, MD 20892, USA.
Vineet ChoudharyNational Institute of Diabetes and Digestive and Kidney Diseases, NIH, Bethesda, MD 20892, USA.
Prasanna Satpute-KrishnanUniformed Services, University of the Health Sciences, Bethesda, MD 20814, USA.
Tim P LevineUniversity College London, Institute of Ophthalmology, London, EC1V 9EL, UK.ORCID http://orcid.org/0000-0002-7231-0775
Andy GoldenNational Institute of Diabetes and Digestive and Kidney Diseases, NIH, Bethesda, MD 20892, USA.
William A PrinzNational Institute of Diabetes and Digestive and Kidney Diseases, NIH, Bethesda, MD 20892, USA. prinzw@helix.nih.gov.
National Institute of Diabetes and Digestive and Kidney Diseases · USUniformed Services University of the Health Sciences · USUniversity College London · GB

Funding

The Investigation of disease causing genes in C. elegansZIADK075075 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI GOLDEN, ANDY · 2012 to 2023
$9.0M
Biogenesis of the endoplasmic reticulumZIADK060105 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI PRINZ, WILLIAM · 2009 to 2022
$8.5M
Growth Regulation in Surgical Diseases of the GutR01DK060105 · NIDDK · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI KO, TIEN C · 2001 to 2005
$1.8M
Biogenesis of the endoplasmic reticulumZ01DK060105 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI PRINZ, WILLIAM · 2007 to 2008
$532k
Biotechnology and Biological Sciences Research Council BB/M011801/1Intramural NIH HHS Z01 DK060105Intramural NIH HHS ZIA DK060105NIDDK NIH HHS R01 DK060105
6 · The paper itself

Abstract

Nascent lipid droplet (LD) formation occurs in the endoplasmic reticulum (ER) membrane but it is not known how sites of biogenesis are determined. We previously identified ER domains in S. cerevisiae containing the reticulon homology domain (RHD) protein Pex30 that are regions where preperoxisomal vesicles (PPVs) form. Here, we show that Pex30 domains are also sites where most nascent LDs form. Mature LDs usually remain associated with Pex30 subdomains, and the same Pex30 subdomain can simultaneously associate with a LD and a PPV or peroxisome. We find that in higher eukaryotes multiple C2 domain containing transmembrane protein (MCTP2) is similar to Pex30: it contains an RHD and resides in ER domains where most nascent LD biogenesis occurs and that often associate with peroxisomes. Together, these findings indicate that most LDs and PPVs form and remain associated with conserved ER subdomains, and suggest a link between LD and peroxisome biogenesis.

Indexed as

Organelle BiogenesisAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsDiacylglycerol O-AcyltransferaseEndoplasmic ReticulumGene DeletionGTP-Binding Protein gamma SubunitsHeLa CellsHumansLipid DropletsMembrane ProteinsMembrane Transport ProteinsMethyltransferasesMutationPeroxisomesCaenorhabditis elegans Proteinsdelta 24-sterol methyltransferaseDGA1 protein, S cerevisiaeDiacylglycerol O-AcyltransferaseGTP-Binding Protein gamma SubunitsMCTP2 protein, humanMembrane ProteinsMembrane Transport ProteinsMethyltransferasesPex30 protein, S cerevisiaeSaccharomyces cerevisiae Proteinsseipin protein, S cerevisiae

Identifiers

PMID30054481
PMCPMC6063926
OpenAlexW2949204612

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.