Evidence map›Paper›PMID 30052648›Full record

ArticlePloS one2018

Surveillance for respiratory and diarrheal pathogens at the human-pig interface in Sarawak, Malaysia.

Laura K Borkenhagen, Kerry A Mallinson, Rick W Tsao, Siaw-Jing Ha, Wei-Honn Lim, Teck-Hock Toh, Benjamin D Anderson, Jane K Fieldhouse, Sarah E Philo, Kuek-Sen Chong and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 74 citations in OpenAlex.

  1. Article
  2. Efficient replication of influenza D virus in the human airway underscores zoonotic potential.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. The virucidal potential effects of violet-blue light on influenza D virus.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2025
    Article
  14. Article
  15. Article
  16. Article
  17. Influenza D virus utilizes both 9-Journal of virology · 2024
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 3 countries.

Laura K BorkenhagenDuke Global Health Institute, Duke University, Durham, North Carolina, United States of America.ORCID 0000-0002-5619-2609
Kerry A MallinsonDuke Global Health Institute, Duke University, Durham, North Carolina, United States of America.
Rick W TsaoDuke Global Health Institute, Duke University, Durham, North Carolina, United States of America.
Siaw-Jing HaSEGi University Sibu Clinical Campus, Sibu, Sarawak, Malaysia.
Wei-Honn LimClinical Research Center, Sibu Hospital, Sibu, Sarawak, Malaysia.ORCID 0000-0002-6408-4747
Teck-Hock TohSEGi University Sibu Clinical Campus, Sibu, Sarawak, Malaysia.ORCID 0000-0001-5909-4855
Benjamin D AndersonDivision of Infectious Disease, School of Medicine, Duke University, Durham, North Carolina, United States of America.
Jane K FieldhouseDuke Global Health Institute, Duke University, Durham, North Carolina, United States of America.
Sarah E PhiloDuke Global Health Institute, Duke University, Durham, North Carolina, United States of America.
Kuek-Sen ChongSEGi University Sibu Clinical Campus, Sibu, Sarawak, Malaysia.
William G LindsleyNational Institute for Occupational Safety and Health, Morgantown, West Virginia, United States of America.
Alejandro RamirezDepartment of Veterinary Diagnostics and Production Animal Medicine, College of Veterinary Medicine, Iowa State University, Ames, Iowa, United States of America.
James F LoweIntegrated Food Animal Management Systems, Department of Veterinary Clinical Medicine, College of Veterinary Medicine, University of Illinois at Urbana-Champaign, Champaign, Illinois, United States of America.
Kristen K ColemanDuke-NUS Medical School, Singapore, Singapore.ORCID 0000-0003-0024-3400
Gregory C GrayDuke Global Health Institute, Duke University, Durham, North Carolina, United States of America.
Duke University · USSibu Hospital · MYDuke-NUS Medical School · SGIowa State University · USNational Institute for Occupational Safety and Health · USUniversity of Illinois Urbana-Champaign · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe large livestock operations and dense human population of Southeast Asia are considered a hot-spot for emerging viruses.

objectivesTo determine if the pathogens adenovirus (ADV), coronavirus (CoV), encephalomyocarditis virus (EMCV), enterovirus (EV), influenza A-D (IAV, IBV, ICV, and IDV), porcine circovirus 2 (PCV2), and porcine rotaviruses A and C (RVA and RVC), are aerosolized at the animal-interface, and if humans working in these environments are carrying these viruses in their nasal airways. STUDY: This cross-sectional study took place in Sarawak, Malaysia among 11 pig farms, 2 abattoirs, and 3 animal markets in June and July of 2017. Pig feces, pig oral secretions, bioaerosols, and worker nasal wash samples were collected and analyzed via rPCR and rRT-PCR for respiratory and diarrheal viruses.

resultsIn all, 55 pig fecal, 49 pig oral or water, 45 bioaerosol, and 78 worker nasal wash samples were collected across 16 sites. PCV2 was detected in 21 pig fecal, 43 pig oral or water, 3 bioaerosol, and 4 worker nasal wash samples. In addition, one or more bioaerosol or pig samples were positive for EV, IAV, and RVC, and one or more worker samples were positive for ADV, CoV, IBV, and IDV.

conclusionsThis study demonstrates that nucleic acids from a number of targeted viruses were present in pig oral secretions and pig fecal samples, and that several viruses were detected in bioaerosol samples or in the nasal passages of humans with occupational exposure to pigs. These results demonstrate the need for future research in strengthening viral surveillance at the human-animal interface, specifically through expanded bioaerosol sampling efforts and a seroepidemiological study of individuals with exposure to pigs in this region for PCV2 infection.

Indexed as

FarmersRespiratory Tract InfectionsVirus DiseasesVirusesAnimalsCross-Sectional StudiesDiarrheaFemaleHumansMalaysiaMaleOccupational ExposureSwineSwine Diseases

Identifiers

PMID30052648
PMCPMC6063427
OpenAlexW2883320709

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.