Evidence map›Paper›PMID 30052294›Full record

ArticleProtein science : a publication of the Protein Society2019

Redox control of iodotyrosine deiodinase.

Jimin Hu, Qi Su, Jamie L Schlessman, Steven E Rokita

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Biochemistry · 2024
    Article
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  9. Evolutionary aspects of the Viridiplantae nitroreductases.Journal, genetic engineering & biotechnology · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jimin HuDepartment of Chemistry, Johns Hopkins University, Baltimore, Maryland, 21218.
Qi SuDepartment of Chemistry, Johns Hopkins University, Baltimore, Maryland, 21218.
Jamie L SchlessmanDepartment of Chemistry, U.S. Naval Academy, Annapolis, Maryland, 21402.ORCID 0000-0001-6184-8134
Steven E RokitaDepartment of Chemistry, Johns Hopkins University, Baltimore, Maryland, 21218.ORCID 0000-0002-2292-2917
Johns Hopkins University · USUnited States Naval Academy · US

Funding

The Role of a Dehalogenase in Drosophila SpermatogenesisR21AI119540 · NIAID · JOHNS HOPKINS UNIVERSITY · PI ROKITA, STEVEN E · 2015 to 2016
$428k
Acquisition of GE Typhoon FLA9500 Variable Mode ImagerS10OD021567 · OD · JOHNS HOPKINS UNIVERSITY · PI MCCAFFERY, J. MICHAEL · 2017 to 2017
$147k
NIAID NIH HHS R21 AI119540NIH HHS AI119540NIH HHS S10 OD021567
6 · The paper itself

Abstract

The redox chemistry of flavoproteins is often gated by substrate and iodotyrosine deiodinase (IYD) has the additional ability to switch between reaction modes based on the substrate. Association of fluorotyrosine (F-Tyr), an inert substrate analog, stabilizes single electron transfer reactions of IYD that are not observed in the absence of this ligand. The co-crystal of F-Tyr and a T239A variant of human IYD have now been characterized to provide a structural basis for control of its flavin reactivity. Coordination of F-Tyr in the active site of this IYD closely mimics that of iodotyrosine and only minor perturbations are observed after replacement of an active site Thr with Ala. However, loss of the side chain hydroxyl group removes a key hydrogen bond from flavin and suppresses the formation of its semiquinone intermediate. Even substitution of Thr with Ser decreases the midpoint potential of human IYD between its oxidized and semiquinone forms of flavin by almost 80 mV. This decrease does not adversely affect the kinetics of reductive dehalogenation although an analogous Ala variant exhibits a 6.7-fold decrease in its k

Indexed as

Amino Acid SubstitutionCatalytic DomainDinitrocresolsHumansIodide PeroxidaseKineticsMutation, MissenseOxidation-Reduction4,6-dinitro-o-cresolDinitrocresolsIodide PeroxidasedehalogenasedeiodinaseflavoproteinhalotyrosineIodotyrosinenitroreductionredox control

Identifiers

PMID30052294
PMCPMC6296174
OpenAlexW2883173700

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.