Evidence map›Paper›PMID 30051838›Full record

ArticleProceedings. Biological sciences2018

Proteomic evidence of dietary sources in ancient dental calculus.

Jessica Hendy, Christina Warinner, Abigail Bouwman, Matthew J Collins, Sarah Fiddyment, Roman Fischer, Richard Hagan, Courtney A Hofman, Malin Holst, Eros Chaves and 10 more

Open access · hybridAbstract readHistorical Article
In one paragraph

Article in Proceedings. Biological sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
14.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 155 citations in OpenAlex.

  1. The Oral Microbiome of King Richard III of England.American journal of biological anthropology · 2026
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  7. Polygenic prediction of human complex traits using ancient DNA.Current opinion in genetics & development · 2025
    Review
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  10. Review
  11. Article
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  14. Human diet of premodern mainland Japan: a meta-analysis of carbon and nitrogen stable isotope ratios.Anthropological science : journal of the Anthropological Society of Nippon = Jinruigaku zasshi · 2024
    Article
  15. Article
  16. Article
  17. Article
  18. Beyond dirty teeth: Integrating dental calculus studies with osteoarchaeological parameters.Quaternary international : the journal of the International Union for Quaternary Research · 2023
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 11 institutions in 7 countries.

Jessica HendyDepartment of Archaeology, Max Planck Institute for the Science of Human History, Jena, Germany hendy@shh.mpg.de.ORCID 0000-0002-3718-1058
Christina WarinnerDepartment of Archaeogenetics, Max Planck Institute for the Science of Human History, Jena, Germany.ORCID 0000-0002-4528-5877
Abigail BouwmanInstitute for Evolutionary Medicine, ETH-Zürich, University of Zürich, Zürich, Switzerland.
Matthew J CollinsBioArCh, Department of Archaeology, University of York, York, UK.ORCID 0000-0003-4226-5501
Sarah FiddymentBioArCh, Department of Archaeology, University of York, York, UK.ORCID 0000-0002-8991-2318
Roman FischerDiscovery Proteomics Facility, Target Discovery Institute, University of Oxford, Oxford, UK.ORCID 0000-0002-9715-5951
Richard HaganDepartment of Archaeogenetics, Max Planck Institute for the Science of Human History, Jena, Germany.
Courtney A HofmanLaboratories of Molecular Anthropology and Microbiome Research, Department of Anthropology, University of Oklahoma, Norman, USA.ORCID 0000-0002-6808-3370
Malin HolstBioArCh, Department of Archaeology, University of York, York, UK.ORCID 0000-0002-4183-7574
Eros ChavesDepartment of Periodontology, College of Dentistry, University of Oklahoma Health Sciences Center, Oklahoma, OK, USA.
Lauren KlausLaboratories of Molecular Anthropology and Microbiome Research, Department of Anthropology, University of Oklahoma, Norman, USA.
Greger LarsonThe Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and the History of Art, University of Oxford, Oxford, UK.ORCID 0000-0002-4092-0392
Meaghan MackieEvoGenomics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.ORCID 0000-0003-0763-7592
Krista McGrathBioArCh, Department of Archaeology, University of York, York, UK.
Amy Z MundorffDepartment of Anthropology, College of Arts and Sciences, University of Tennessee, Knoxville, TN, USA.
Anita RadiniBioArCh, Department of Archaeology, University of York, York, UK.
Huiyun RaoKey Laboratory of Vertebrate Evolution and Human Origins of Chinese Academy of Sciences, Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of Sciences, Beijing, People's Republic of China.
Christian TrachselFunctional Genomics Center, ETH-Zürich, University of Zürich, Zürich, Switzerland.
Irina M VelskoThe Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and the History of Art, University of Oxford, Oxford, UK.
Camilla F SpellerBioArCh, Department of Archaeology, University of York, York, UK camilla.speller@york.ac.uk.ORCID 0000-0001-7128-9903
University of Oxford · GBUniversity of York · GBUniversity of Zurich · CHMax Planck Institute for the Science of Human History · DEUniversity of Copenhagen · DKUniversity of Oklahoma Health Sciences Center · USChinese Academy of Sciences · CNKnoxville College · USUniversity of British Columbia · CAUniversity of Oklahoma · USYork Osteoarchaeology (United Kingdom) · GB

Funding

Wellcome TrustWellcome Trust 097829/Z/11/AWellcome Trust 108375/Z/15/Z
6 · The paper itself

Abstract

Archaeological dental calculus has emerged as a rich source of ancient biomolecules, including proteins. Previous analyses of proteins extracted from ancient dental calculus revealed the presence of the dietary milk protein β-lactoglobulin, providing direct evidence of dairy consumption in the archaeological record. However, the potential for calculus to preserve other food-related proteins has not yet been systematically explored. Here we analyse shotgun metaproteomic data from 100 archaeological dental calculus samples ranging from the Iron Age to the post-medieval period (eighth century BC to nineteenth century AD) in England, as well as 14 dental calculus samples from contemporary dental patients and recently deceased individuals, to characterize the range and extent of dietary proteins preserved in dental calculus. In addition to milk proteins, we detect proteomic evidence of foodstuffs such as cereals and plant products, as well as the digestive enzyme salivary amylase. We discuss the importance of optimized protein extraction methods, data analysis approaches and authentication strategies in the identification of dietary proteins from archaeological dental calculus. This study demonstrates that proteomic approaches can robustly identify foodstuffs in the archaeological record that are typically under-represented due to their poor macroscopic preservation.

Indexed as

ProteomeArchaeologyDental CalculusDietDNA, AncientEnglandHistory, 15th CenturyHistory, 16th CenturyHistory, 17th CenturyHistory, 18th CenturyHistory, 19th CenturyHistory, AncientHistory, MedievalDNA, AncientProteomedental calculusdietary reconstructionmass spectrometryproteomics

Identifiers

PMID30051838
PMCPMC6083251
OpenAlexW2884571619

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.