Evidence map›Paper›PMID 30051644›Full record

ArticleMolecular ecology2018

Spatiotemporal dynamics and genome-wide association genome-wide association analysis of desiccation tolerance in Drosophila melanogaster.

Subhash Rajpurohit, Eran Gefen, Alan O Bergland, Dmitri A Petrov, Allen G Gibbs, Paul S Schmidt

Abstract read
In one paragraph

Article in Molecular ecology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 54 citations in OpenAlex.

  1. Pooled it
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  4. Early life-stage thermal resilience is determined by climate-linked regulatory variation.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  7. Evolution letters · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 2 countries.

Subhash RajpurohitDepartment of Biology, University of Pennsylvania, Philadelphia, Pennsylvania.ORCID 0000-0001-9149-391X
Eran GefenDepartment of Biology, University of Haifa-Oranim, Tivon, Israel.
Alan O BerglandDepartment of Biology, University of Virginia, Charlottesville, VA.
Dmitri A PetrovDepartment of Biology, Stanford University, Stanford, CA.
Allen G GibbsSchool of Life Sciences, University of Nevada, Las Vegas, NV.
Paul S SchmidtDepartment of Biology, University of Pennsylvania, Philadelphia, Pennsylvania.
University of Pennsylvania · USOranim Academic College of Education · ILStanford University · USUniversity of Nevada, Las Vegas · USUniversity of Virginia · US

Funding

Genomics of rapid adaptation in the lab and in the wildR35GM118165 · NIGMS · STANFORD UNIVERSITY · PI Dmitri Petrov · 2016 to 2026
$8.3M
Genomics of rapid adaptation on seasonal timescales in D. melanogasterR01GM100366 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI SCHMIDT, PAUL · 2012 to 2019
$3.3M
Steroid Hormone Signaling in Genetically Obese DrosophilaR15GM100395 · NIGMS · UNIVERSITY OF NEVADA LAS VEGAS · PI ANDRES, ANDREW J, GIBBS, ALLEN · 2012 to 2012
$286k
Genomics of natural populationsF32GM097837 · NIGMS · STANFORD UNIVERSITY · PI BERGLAND, ALAN OLAV · 2011 to 2013
$148k
NIGMS NIH HHS F32 GM097837NIGMS NIH HHS R01 GM100366NIGMS NIH HHS R15 GM100395NIGMS NIH HHS R35 GM118165
6 · The paper itself

Abstract

Water availability is a major environmental challenge to a variety of terrestrial organisms. In insects, desiccation tolerance varies predictably over spatial and temporal scales and is an important physiological determinant of fitness in natural populations. Here, we examine the dynamics of desiccation tolerance in North American populations of Drosophila melanogaster using: (a) natural populations sampled across latitudes and seasons; (b) experimental evolution in field mesocosms over seasonal time; (c) genome-wide associations to identify SNPs/genes associated with variation for desiccation tolerance; and (d) subsequent analysis of patterns of clinal/seasonal enrichment in existing pooled sequencing data of populations sampled in both North America and Australia. A cline in desiccation tolerance was observed, for which tolerance exhibited a positive association with latitude; tolerance also varied predictably with culture temperature, demonstrating a significant degree of thermal plasticity. Desiccation tolerance evolved rapidly in field mesocosms, although only males showed differences in desiccation tolerance between spring and autumn collections from natural populations. Water loss rates did not vary significantly among latitudinal or seasonal populations; however, changes in metabolic rates during prolonged exposure to dry conditions are consistent with increased tolerance in higher latitude populations. Genome-wide associations in a panel of inbred lines identified twenty-five SNPs in twenty-one loci associated with sex-averaged desiccation tolerance, but there is no robust signal of spatially varying selection on genes associated with desiccation tolerance. Together, our results suggest that desiccation tolerance is a complex and important fitness component that evolves rapidly and predictably in natural populations.

Indexed as

Genetics, PopulationAdaptation, PhysiologicalAnimalsAustraliaDehydrationDrosophila melanogasterGenetic Association StudiesNorth AmericaPolymorphism, Single NucleotideSeasonsSpatio-Temporal AnalysisTemperatureclinedesiccation toleranceDrosophilaplasticityseason

Identifiers

PMID30051644
PMCPMC6129450
OpenAlexW2884929472

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.