Evidence map›Paper›PMID 30051342›Full record

ArticleArchives of virology2018

Detection, sequence analysis, and antibody prevalence of porcine deltacoronavirus in Taiwan.

Tien-Huan Hsu, Hao-Ping Liu, Chieh-Yu Chin, Chinling Wang, Wan-Zhen Zhu, Bing-Lin Wu, Yu-Chung Chang

Abstract read
In one paragraph

Article in Archives of virology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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  16. Detection and spike gene characterization in porcine deltacoronavirus in China during 2016-2018.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2019
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  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Tien-Huan HsuDepartment of Veterinary Medicine, College of Veterinary Medicine, National Chung-Hsing University, Taichung, Taiwan ROC.
Hao-Ping LiuDepartment of Veterinary Medicine, College of Veterinary Medicine, National Chung-Hsing University, Taichung, Taiwan ROC.
Chieh-Yu ChinDepartment of Veterinary Medicine, College of Veterinary Medicine, National Chung-Hsing University, Taichung, Taiwan ROC.
Chinling WangDepartment of Basic Sciences, College of Veterinary Medicine, Mississippi State University, Starkville, MS, USA.
Wan-Zhen ZhuDepartment of Biotechnology, School of Health Technology, Ming Chuan University, 5 De-Ming Rd, Gui-Shan, Taoyuan City, 333, Taiwan ROC.
Bing-Lin WuDepartment of Biotechnology, School of Health Technology, Ming Chuan University, 5 De-Ming Rd, Gui-Shan, Taoyuan City, 333, Taiwan ROC.
Yu-Chung ChangDepartment of Biotechnology, School of Health Technology, Ming Chuan University, 5 De-Ming Rd, Gui-Shan, Taoyuan City, 333, Taiwan ROC. d80106@mail.mcu.edu.tw.ORCID http://orcid.org/0000-0001-5420-631X

Funding

BAPHIQ, Taiwan 105AS-10.1.2-BQ-B1BAPHIQ, Taiwan 106AS-9.1.2-BQ-B1
6 · The paper itself

Abstract

Porcine deltacoronavirus (PDCoV) was initially documented in Hong Kong and later in the United States, South Korea, and Thailand. To investigate if PDCoV is also present in Taiwan, three swine coronaviruses-PDCoV, porcine epidemic diarrhea virus (PEDV), and transmissible gastroenteritis coronavirus (TGEV)-were tested using real-time reverse transcription polymerase chain reaction (rRT-PCR) in 172 rectal swab samples from piglets exhibiting diarrhea between January 2016 and May 2017 on 68 pig farms in Taiwan. The rRT-PCR results were positive for PDCoV (29/172, 16.9%), PEDV (36/172, 20.9%), TGEV (2/172, 1.2%), and coinfections (16/172, 9.3%). After cloning and sequencing, PDCoV nucleocapsid genes were analyzed. Phylogeny results indicated that the nucleotide sequences of all isolates were like those reported in other countries. To further trace PDCoV in the period of 2011 to 2015, an enzyme-linked immunosorbent assay (ELISA) was used to detect antibodies against PDCoV. The results showed that 279 of 1,039 (26.9%) sera were positive for the PDCoV nucleocapsid protein, implying that PDCoV might have existed in Taiwan before 2011.

Indexed as

AnimalsAntibodies, ViralCoronavirusCoronavirus InfectionsDiarrheaEnzyme-Linked Immunosorbent AssayFemaleMalePhylogenySequence Analysis, DNASwineSwine DiseasesTaiwanAntibodies, Viral

Identifiers

PMID30051342
PMCPMC7086614

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.