Evidence map›Paper›PMID 30049955›Full record

ArticleMolecules (Basel, Switzerland)2018

HIV-1 Integrase-Targeted Short Peptides Derived from a Viral Protein R Sequence.

Xue Zhi Zhao, Mathieu Métifiot, Evgeny Kiselev, Jacques J Kessl, Kasthuraiah Maddali, Christophe Marchand, Mamuka Kvaratskhelia, Yves Pommier, Terrence R Burke

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.1field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Leveraging the therapeutic, biological, and self-assembling potential of peptides for the treatment of viral infections.Journal of controlled release : official journal of the Controlled Release Society · 2022
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Xue Zhi ZhaoChemical Biology Laboratory, Center of Cancer Research, Frederick, MD 21702, USA. Xuezhi.Zhao@nih.gov.ORCID 0000-0003-1006-6364
Mathieu MétifiotDevelopmental Therapeutics Branch and Laboratory of Molecular Pharmacology, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA. mathieu.metifiot@u-bordeaux.fr.
Evgeny KiselevDevelopmental Therapeutics Branch and Laboratory of Molecular Pharmacology, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA. evgeny.kiselev@nih.gov.
Jacques J KesslCollege of Pharmacy and Center for Retrovirus Research, The Ohio State University, Columbus, OH 43210, USA. Jacques.Kessl@usm.edu.ORCID 0000-0001-8103-6678
Kasthuraiah MaddaliDevelopmental Therapeutics Branch and Laboratory of Molecular Pharmacology, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA. maddalik@makorelabs.com.
Christophe MarchandDevelopmental Therapeutics Branch and Laboratory of Molecular Pharmacology, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA. marchanc@mail.nih.gov.
Mamuka KvaratskheliaCollege of Pharmacy and Center for Retrovirus Research, The Ohio State University, Columbus, OH 43210, USA. MAMUKA.KVARATSKHELIA@UCDENVER.EDU.
Yves PommierDevelopmental Therapeutics Branch and Laboratory of Molecular Pharmacology, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA. Yves.Pommier@nih.gov.
Terrence R BurkeChemical Biology Laboratory, Center of Cancer Research, Frederick, MD 21702, USA. burkete@mail.nih.gov.
National Institutes of Health · USThe Ohio State University · USUniversity of Southern Mississippi · US

Funding

Training and Mentoring Core P20GM103476 · NIGMS · UNIVERSITY OF SOUTHERN MISSISSIPPI · PI MICHAEL R GARRETT · 2012 to 2026
$60.2M
X-ray Crystallographic Fragment Screening CoreU54AI150472 · NIAID · SEATTLE CHILDREN'S HOSPITAL · PI KVARATSKHELIA, MAMUKA · 2019 to 2021
$15.7M
Design and Synthesis of HIV Integrase as Potential Anti-AIDS DrugsZIABC007363 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI BURKE, TERRENCE · 2009 to 2025
$11.7M
X-ray Crystallographic Fragment Screening CoreU54GM103368 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI TORBETT, BRUCE EDWARD · 2017 to 2018
$11.1M
Multimeric HIV-1 Integrase InhibitorsR01AI110310 · NIAID · UNIVERSITY OF COLORADO DENVER · PI KVARATSKHELIA, MAMUKA · 2014 to 2018
$2.2M
Mode of Action of Allosteric HIV-1 Integrase Inhibitors during Late Steps of Viral ReplicationR21AI127282 · NIAID · UNIVERSITY OF SOUTHERN MISSISSIPPI · PI KESSL, JACQUES J. · 2016 to 2017
$406k
NIAID NIH HHS R21 AI127282NIGMS NIH HHS P20 GM103476NIGMS NIH HHS U54 GM103368
6 · The paper itself

Abstract

HIV-1 integrase (IN) inhibitors represent a new class of highly effective anti-AIDS therapeutics. Current FDA-approved IN strand transfer inhibitors (INSTIs) share a common mechanism of action that involves chelation of catalytic divalent metal ions. However, the emergence of IN mutants having reduced sensitivity to these inhibitors underlies efforts to derive agents that antagonize IN function by alternate mechanisms. Integrase along with the 96-residue multifunctional accessory protein, viral protein R (Vpr), are both components of the HIV-1 pre-integration complex (PIC). Coordinated interactions within the PIC are important for viral replication. Herein, we report a 7-mer peptide based on the shortened Vpr (69⁻75) sequence containing a biotin group and a photo-reactive benzoylphenylalanyl residue, and which exhibits low micromolar IN inhibitory potency. Photo-crosslinking experiments have indicated that the peptide directly binds IN. The peptide does not interfere with IN-DNA interactions or induce higher-order, aberrant IN multimerization, suggesting a mode of action for the peptide that is distinct from clinically used INSTIs and developmental allosteric IN inhibitors. This compact Vpr-derived peptide may serve as a valuable pharmacological tool to identify a potential new pharmacologic site.

Indexed as

Amino Acid SequenceGene Products, vprHIV-1HIV InfectionsHIV IntegraseHIV Integrase InhibitorsMagnetic Resonance SpectroscopyModels, MolecularPeptidesProtein BindingProtein ConformationProtein Interaction Domains and MotifsProtein MultimerizationGene Products, vprHIV IntegraseHIV Integrase Inhibitorsp31 integrase protein, Human immunodeficiency virus 1PeptidesHIV-1 integraseinhibitorphotoaffinity probeviral protein R

Identifiers

PMID30049955
PMCPMC6222646
OpenAlexW2883860225

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.