Evidence map›Paper›PMID 30049793›Full record

ArticleThe Journal of biological chemistry2018

Defective mucin-type glycosylation on α-dystroglycan in COG-deficient cells increases its susceptibility to bacterial proteases.

Seok-Ho Yu, Peng Zhao, Pradeep K Prabhakar, Tiantian Sun, Aaron Beedle, Geert-Jan Boons, Kelley W Moremen, Lance Wells, Richard Steet

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Seok-Ho YuFrom the Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602.
Peng ZhaoFrom the Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602.
Pradeep K PrabhakarFrom the Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602.
Tiantian SunFrom the Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602.
Aaron BeedleFrom the Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602.
Geert-Jan BoonsFrom the Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602.
Kelley W MoremenFrom the Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602.
Lance WellsFrom the Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602.
Richard SteetFrom the Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602 rsteet@ccrc.uga.edu.
University of Georgia · US

Funding

TR&D3. Approaches to Proteoglycan Function at Biochemical and Cellular LevelsP41GM103390 · NIGMS · UNIVERSITY OF GEORGIA · PI MOREMEN, KELLEY W. · 2012 to 2019
$14.5M
Recombinant Production of Glycosylation Enzymes for Biochem/Structural StudiesP01GM107012 · NIGMS · UNIVERSITY OF GEORGIA · PI PRESTEGARD, JAMES H. · 2013 to 2017
$7.5M
Structure and Function in alpha-Dystroglycan GlycosylationR01GM111939 · NIGMS · UNIVERSITY OF GEORGIA · PI Lance Wells · 2014 to 2026
$4.0M
NIGMS NIH HHS P01 GM107012NIGMS NIH HHS P41 GM103390NIGMS NIH HHS R01 GM111939
6 · The paper itself

Abstract

Deficiency in subunits of the conserved oligomeric Golgi (COG) complex results in pleiotropic defects in glycosylation and causes congenital disorders in humans. Insight regarding the functional consequences of this defective glycosylation and the identity of specific glycoproteins affected is lacking. A chemical glycobiology strategy was adopted to identify the surface glycoproteins most sensitive to altered glycosylation in COG-deficient Chinese hamster ovary (CHO) cells. Following metabolic labeling, an unexpected increase in GalNAz incorporation into several glycoproteins, including α-dystroglycan (α-DG), was noted in

Indexed as

AnimalsBacteriaCHO CellsCricetulusDystroglycansGlycoproteinsGlycosylationHalf-LifeMucinsPeptide HydrolasesPolysaccharide-LyasesDystroglycansGlycoproteinshyaluronate lyaseMucinsPeptide HydrolasesPolysaccharide-Lyasesclick chemistryconserved oligomeric Golgi complexdystroglycanglycobiologymucin-type glycanneuraminidaseprotease

Identifiers

PMID30049793
PMCPMC6139567
OpenAlexW2884159674

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.