Evidence map›Paper›PMID 30048196›Full record

ArticleXenobiotica; the fate of foreign compounds in biological systems2019

Site-specific oxidation of flavanone and flavone by cytochrome P450 2A6 in human liver microsomes.

Haruna Nagayoshi, Norie Murayama, Kensaku Kakimoto, Shigeo Takenaka, Jun Katahira, Young-Ran Lim, Vitchan Kim, Donghak Kim, Hiroshi Yamazaki, Masayuki Komori and 2 more

Abstract read
In one paragraph

Article in Xenobiotica; the fate of foreign compounds in biological systems, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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  5. Preference forXenobiotica; the fate of foreign compounds in biological systems · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Haruna Nagayoshia Osaka Institute of Public Health , Osaka , Japan.
Norie Murayamab Laboratory of Drug Metabolism and Pharmacokinetics , Showa Pharmaceutical University , Machida , Tokyo , Japan.
Kensaku Kakimotoa Osaka Institute of Public Health , Osaka , Japan.
Shigeo Takenakac Graduate School of Comprehensive Rehabilitation , Osaka Prefecture University , Habikino Osaka , Japan.
Jun Katahirad Laboratory of Cellular and Molecular Biology , Veterinary Sciences, Osaka Prefecture University , Izumisano , Osaka , Japan.
Young-Ran Lime Department of Biological Sciences , Konkuk University , Seoul , Korea.
Vitchan Kime Department of Biological Sciences , Konkuk University , Seoul , Korea.
Donghak Kime Department of Biological Sciences , Konkuk University , Seoul , Korea.
Hiroshi Yamazakib Laboratory of Drug Metabolism and Pharmacokinetics , Showa Pharmaceutical University , Machida , Tokyo , Japan.ORCID http://orcid.org/0000-0002-1068-4261
Masayuki Komorid Laboratory of Cellular and Molecular Biology , Veterinary Sciences, Osaka Prefecture University , Izumisano , Osaka , Japan.
F Peter Guengerichf Department of Biochemistry Vanderbilt University School of Medicine , Nashville , Tennessee , USA.
Tsutomu Shimadad Laboratory of Cellular and Molecular Biology , Veterinary Sciences, Osaka Prefecture University , Izumisano , Osaka , Japan.
Osaka Prefecture University · JPKonkuk University · KROsaka Prefectural Institute of Public Health · JPShowa Pharmaceutical University · JPVanderbilt University · US

Funding

Metabolism of Carcinogens and Drugs by Human P450sR01GM118122 · NIGMS · VANDERBILT UNIVERSITY · PI GUENGERICH, F PETER · 2016 to 2023
$3.3M
NIGMS NIH HHS R01 GM118122
6 · The paper itself

Abstract

The roles of human cytochrome P450 (P450 or CYP) 2A6 in the oxidation of flavanone [(2R)- and (2S)-enantiomers] and flavone were studied in human liver microsomes and recombinant human P450 enzymes. CYP2A6 was highly active in oxidizing flavanone to form flavone, 2'-hydroxy-, 4'-, and 6-hydroxyflavanones and in oxidizing flavone to form mono- and di-hydroxylated products, such as mono-hydroxy flavones M6, M7, and M11 and di-hydroxy flavones M3, M4, and M5. Liver microsomes prepared from human sample HH2, defective in coumarin 7-hydroxylation activity, were very inefficient in forming 2'-hydroxyflavanone from flavanone and a mono-hydroxylated product, M6, from flavone. Coumarin and anti-CYP2A6 antibodies strongly inhibited the formation of these metabolites in microsomes prepared from liver samples HH47 and 54, which were active in coumarin oxidation activities. Molecular docking analysis showed that the C2'-position of (2R)-flavanone (3.8 Å) was closer to the iron center of CYP2A6 than the C6-position (10 Å), while distances from C2' and C6 of (2S)-flavanone to the CYP2A6 were 6.91 Å and 5.42 Å, respectively. These results suggest that CYP2A6 catalyzes site-specific oxidation of (racemic) flavanone and also flavone in human liver microsomes. CYP1A2 and CYP2B6 were also found to play significant roles in some of the oxidations of these flavonoids by human liver microsomes.

Indexed as

Cytochrome P-450 CYP1A2Cytochrome P-450 CYP2A6Cytochrome P-450 CYP2B6FlavanonesFlavonesHumansMicrosomes, LiverOxidation-ReductionCYP1A2 protein, humanCYP2A6 protein, humanCYP2B6 protein, humanCytochrome P-450 CYP1A2Cytochrome P-450 CYP2A6Cytochrome P-450 CYP2B6flavanoneFlavanonesflavoneFlavonesCYP1A2CYP2A6CYP2B6Flavanoneflavonehumanliver microsomesoxidation

Identifiers

PMID30048196
PMCPMC6438780
OpenAlexW2883054296

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.