Evidence map›Paper›PMID 30047865›Full record

ArticleeLife2018

Unified mechanisms for self-RNA recognition by RIG-I Singleton-Merten syndrome variants.

Charlotte Lässig, Katja Lammens, Jacob Lucián Gorenflos López, Sebastian Michalski, Olga Fettscher, Karl-Peter Hopfner

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 38 citations in OpenAlex.

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  11. Universality in RNA and DNA deformations induced by salt, temperature change, stretching force, and protein binding.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
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  16. Cellular origins of dsRNA, their recognition and consequences.Nature reviews. Molecular cell biology · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Charlotte LässigDepartment of Biochemistry, Ludwig-Maximilians-Universität München, Munich, Germany.ORCID http://orcid.org/0000-0001-6253-7880
Katja LammensDepartment of Biochemistry, Ludwig-Maximilians-Universität München, Munich, Germany.ORCID https://orcid.org/0000-0002-4438-1381
Jacob Lucián Gorenflos LópezDepartment of Biochemistry, Ludwig-Maximilians-Universität München, Munich, Germany.
Sebastian MichalskiDepartment of Biochemistry, Ludwig-Maximilians-Universität München, Munich, Germany.
Olga FettscherDepartment of Biochemistry, Ludwig-Maximilians-Universität München, Munich, Germany.
Karl-Peter HopfnerDepartment of Biochemistry, Ludwig-Maximilians-Universität München, Munich, Germany.ORCID http://orcid.org/0000-0002-4528-8357
Ludwig-Maximilians-Universität München · DECenter for Integrated Protein Science Munich · DE

Funding

Bayerisches Staatsministerium für Bildung und Kultus, Wissenschaft und Kunst BioSysNetDeutsche Forschungsgemeinschaft CIPSMDeutsche Forschungsgemeinschaft CRC1054 project B02Deutsche Forschungsgemeinschaft CRC/TRR 237Deutsche Forschungsgemeinschaft HO2489/8German Excellence Initiative CIPSM
6 · The paper itself

Abstract

The innate immune sensor retinoic acid-inducible gene I (RIG-I) detects cytosolic viral RNA and requires a conformational change caused by both ATP and RNA binding to induce an active signaling state and to trigger an immune response. Previously, we showed that ATP hydrolysis removes RIG-I from lower-affinity self-RNAs (<xref ref-type="bibr" rid="bib19">Lässig et al., 2015</xref>), revealing how ATP turnover helps RIG-I distinguish viral from self-RNA and explaining why a mutation in a motif that slows down ATP hydrolysis causes the autoimmune disease Singleton-Merten syndrome (SMS). Here we show that a different, mechanistically unexplained SMS variant, C268F, which is localized in the ATP-binding P-loop, can signal independently of ATP but is still dependent on RNA. The structure of RIG-I C268F in complex with double-stranded RNA reveals that C268F helps induce a structural conformation in RIG-I that is similar to that induced by ATP. Our results uncover an unexpected mechanism to explain how a mutation in a P-loop ATPase can induce a gain-of-function ATP state in the absence of ATP.

Indexed as

AAA ProteinsAdenosine TriphosphatasesAdenosine TriphosphateAortic DiseasesCytosolDEAD Box Protein 58Dental Enamel HypoplasiaHumansHydrolysisImmunity, InnateMetacarpusMuscular DiseasesMutationOdontodysplasiaOsteoporosisProtein BindingAAA ProteinsAdenosine TriphosphatasesAdenosine TriphosphateDEAD Box Protein 58Receptors, ImmunologicRIGI protein, humanRNA, Double-StrandedRNA, ViralATPase domainautoimmune response/diseasehumanimmunologyinflammationinnate immune systemmolecular biophysicsRIG-IRLRSingleton-Merten syndromestructural biology

Identifiers

PMID30047865
PMCPMC6086658
OpenAlexW2884771703

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.