Evidence map›Paper›PMID 30047283›Full record

ArticleAmerican journal of physiology. Lung cellular and molecular physiology2018

Lung omics signatures in a bronchopulmonary dysplasia and pulmonary hypertension-like murine model.

Amrit Kumar Shrestha, Vashisht Y N Gopal, Renuka T Menon, Joseph L Hagan, Shixia Huang, Binoy Shivanna

Open access · bronzeAbstract read
In one paragraph

Article in American journal of physiology. Lung cellular and molecular physiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 25 citations in OpenAlex.

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  13. EndothelialAntioxidants (Basel, Switzerland) · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Amrit Kumar ShresthaSection of Neonatology, Department of Pediatrics, Baylor College of Medicine , Houston, Texas.
Vashisht Y N GopalDepartment of Melanoma Medical Oncology and Department of Translational Molecular Pathology, The University of Texas MD Anderson Cancer Center , Houston, Texas.
Renuka T MenonSection of Neonatology, Department of Pediatrics, Baylor College of Medicine , Houston, Texas.
Joseph L HaganSection of Neonatology, Department of Pediatrics, Baylor College of Medicine , Houston, Texas.
Shixia HuangDan L. Duncan Cancer Center, Department of Molecular and Cellular Biology, Baylor College of Medicine , Houston, Texas.
Binoy ShivannaSection of Neonatology, Department of Pediatrics, Baylor College of Medicine , Houston, Texas.
Baylor College of Medicine · USThe University of Texas MD Anderson Cancer Center · US

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI Michael M Ittmann · 2007 to 2026
$73.9M
Modulation of Neonatal Hyperoxic Lung Injury by the Aryl Hydrocarbon ReceptorK08HD073323 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI SHIVANNA, BINOY · 2013 to 2017
$649k
NCI NIH HHS P30 CA125123NICHD NIH HHS K08 HD073323
6 · The paper itself

Abstract

Bronchopulmonary dysplasia (BPD), the most common chronic lung disease in infants, is associated with long-term morbidities, including pulmonary hypertension (PH). Importantly, hyperoxia causes BPD and PH; however, the underlying mechanisms remain unclear. Herein, we performed high-throughput transcriptomic and proteomic studies using a clinically relevant murine model of BPD with PH. Neonatal wild-type C57BL6J mice were exposed to 21% oxygen (normoxia) or 70% oxygen (hyperoxia) during postnatal days (PNDs) 1-7. Lung tissues were collected for proteomic and genomic analyses on PND 7, and selected genes and proteins were validated by real-time quantitative PCR and immunoblotting analysis, respectively. Hyperoxia exposure dysregulated the expression of 344 genes and 21 proteins. Interestingly, hyperoxia downregulated genes involved in neuronal development and maturation in lung tissues. Gene set enrichment and gene ontology analyses identified apoptosis, oxidoreductase activity, plasma membrane integrity, organ development, angiogenesis, cell proliferation, and mitophagy as the predominant processes affected by hyperoxia. Furthermore, selected deregulated proteins strongly correlated with the expression of specific genes. Collectively, our results identified several potential therapeutic targets for hyperoxia-mediated BPD and PH in infants.

Indexed as

TranscriptomeAnimalsAnimals, NewbornBiomarkersBronchopulmonary DysplasiaDisease Models, AnimalFemaleHumansHypertension, PulmonaryLungMaleMiceMice, Inbred C57BLProteomeBiomarkersProteomebronchopulmonary dysplasiahyperoxiaproteomicspulmonary hypertensiontranscriptomics

Identifiers

PMID30047283
PMCPMC6295503
OpenAlexW2884448913

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.