Evidence map›Paper›PMID 30047043›Full record

ArticleCell biochemistry and biophysics2019

Conformational Changes and Membrane Interaction of the Bacterial Phospholipase, ExoU: Characterization by Site-Directed Spin Labeling.

Jimmy B Feix, Samantha Kohn, Maxx H Tessmer, David M Anderson, Dara W Frank

Abstract read
In one paragraph

Article in Cell biochemistry and biophysics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.3field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Interactions of the effector ExoU fromThe Journal of biological chemistry · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jimmy B FeixDepartment of Biophysics, Medical College of Wisconsin, Milwaukee, WI, 53226, USA. jfeix@mcw.edu.
Samantha KohnDepartment of Biophysics, Medical College of Wisconsin, Milwaukee, WI, 53226, USA.
Maxx H TessmerDepartment of Microbiology and Immunology, Medical College of Wisconsin, Milwaukee, WI, 53226, USA.
David M AndersonDepartment of Pathology, Microbiology and Immunology, Vanderbilt University, Nashville, TN, 37232, USA.
Dara W FrankDepartment of Microbiology and Immunology, Medical College of Wisconsin, Milwaukee, WI, 53226, USA.
Medical College of Wisconsin · USVanderbilt University · US

Funding

TR&D Project 3P41EB001980 · NIBIB · MEDICAL COLLEGE OF WISCONSIN · PI KLUG, CANDICE S · 2003 to 2017
$16.3M
Type III effector-cofactor dynamics within the cellular environmentR01AI104922 · NIAID · MEDICAL COLLEGE OF WISCONSIN · PI FEIX, JIMMY, FRANK, DARA W. · 2013 to 2021
$3.7M
Mechanism of Activation and Membrane Interactions of Pseudomonas toxin ExoUR01GM114234 · NIGMS · MEDICAL COLLEGE OF WISCONSIN · PI FEIX, JIMMY · 2015 to 2018
$1.2M
Acquisition of a Bruker E580 Pulse EPR SpectrometerS10RR022422 · NCRR · MEDICAL COLLEGE OF WISCONSIN · PI KLUG, CANDICE S · 2007 to 2007
$500k
Acquisition of Q-band Pulsed EPR CapabilityS10OD011937 · OD · MEDICAL COLLEGE OF WISCONSIN · PI KLUG, CANDICE S · 2012 to 2012
$381k
National Institute of Allergy and Infectious Diseases 104992National Institute of General Medical Sciences 114234NCRR NIH HHS S10 RR022422NIAID NIH HHS R01 AI104922NIBIB NIH HHS P41 EB001980NIGMS NIH HHS R01 GM114234NIH HHS S10 OD011937
6 · The paper itself

Abstract

Numerous pathogenic bacteria produce proteins evolved to facilitate their survival and dissemination by modifying the host environment. These proteins, termed effectors, often play a significant role in determining the virulence of the infection. Consequently, bacterial effectors constitute an important class of targets for the development of novel antibiotics. ExoU is a potent phospholipase effector produced by the opportunistic pathogen Pseudomonas aeruginosa. Previous studies have established that the phospholipase activity of ExoU requires non-covalent interaction with ubiquitin, however the molecular details of the mechanism of activation and the manner in which ExoU associates with a target lipid bilayer are not understood. In this review we describe our recent studies using site-directed spin labeling (SDSL) and EPR spectroscopy to elucidate the conformational changes and membrane interactions that accompany activation of ExoU. We find that ubiquitin binding and membrane interaction act synergistically to produce structural transitions that occur upon ExoU activation, and that the C-terminal four-helix bundle of ExoU functions as a phospholipid-binding domain, facilitating the association of ExoU with the membrane surface.

Indexed as

Bacterial ProteinsElectron Spin Resonance SpectroscopyLiposomesPhospholipasesProtein BindingPseudomonas aeruginosaSpin LabelsUbiquitinBacterial ProteinsLiposomesPhospholipasesSpin LabelsUbiquitinEPRExoUPhospholipasePseudomonas aeruginosaSpin labeling

Identifiers

PMID30047043
PMCPMC6347562
OpenAlexW2883109658

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.