Evidence map›Paper›PMID 30046013›Full record

ArticleJCI insight2018

Site-1 protease deficiency causes human skeletal dysplasia due to defective inter-organelle protein trafficking.

Yuji Kondo, Jianxin Fu, Hua Wang, Christopher Hoover, J Michael McDaniel, Richard Steet, Debabrata Patra, Jianhua Song, Laura Pollard, Sara Cathey and 14 more

Open access · goldAbstract read
In one paragraph

Article in JCI insight, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Structural basis for substrate selectivity by site-one protease revealed by studies with a small-molecule inhibitor.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Update on the Genetics of Osteogenesis Imperfecta.Calcified tissue international · 2024
    Review
  10. Article
  11. Dominant missense variants in SREBF2 are associated with complex dermatological, neurological, and skeletal abnormalities.Genetics in medicine : official journal of the American College of Medical Genetics · 2024
    Article
  12. Article
  13. Article
  14. Exome Sequencing Reveals Biallelic Mutations inDiagnostics (Basel, Switzerland) · 2024
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 6 institutions in 3 countries.

Yuji KondoCardiovascular Biology Research Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, USA.
Jianxin FuCardiovascular Biology Research Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, USA.
Hua WangDepartment of Pediatrics and.
Christopher HooverCardiovascular Biology Research Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, USA.
J Michael McDanielCardiovascular Biology Research Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, USA.
Richard SteetComplex Carbohydrate Research Center, University of Georgia, Georgia, Athens, USA.
Debabrata PatraDepartment of Orthopaedic Surgery, Washington University School of Medicine, St. Louis, Missouri, USA.
Jianhua SongCardiovascular Biology Research Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, USA.
Laura PollardGreenwood Genetic Center, Greenwood, South Carolina, USA.
Sara CatheyGreenwood Genetic Center, Greenwood, South Carolina, USA.
Tadayuki YagoCardiovascular Biology Research Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, USA.
Graham WileyDivision of Genomics and Data Sciences, Arthritis and Clinical Immunology Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, USA.
Susan MacwanaDivision of Genomics and Data Sciences, Arthritis and Clinical Immunology Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, USA.
Joel GuthridgeDivision of Genomics and Data Sciences, Arthritis and Clinical Immunology Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, USA.
Samuel McGeeCardiovascular Biology Research Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, USA.
Shibo LiDepartment of Pediatrics and.
Courtney GriffinCardiovascular Biology Research Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, USA.
Koichi FurukawaDepartment of Biochemistry II, Nagoya University Graduate School of Medicine, Nagoya, Japan.
Judith A JamesDivision of Genomics and Data Sciences, Arthritis and Clinical Immunology Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, USA.
Changgeng RuanJiangsu Institute of Hematology, MOH Key Laboratory of Thrombosis and Hemostasis, Collaborative Innovation Center of Hematology, The First Affiliated Hospital of Soochow University, Suzhou, China.
Rodger P McEverCardiovascular Biology Research Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, USA.
Klaas J WierengaDepartment of Pediatrics and.
Patrick M GaffneyDivision of Genomics and Data Sciences, Arthritis and Clinical Immunology Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, USA.
Lijun XiaCardiovascular Biology Research Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, USA.
Oklahoma Medical Research Foundation · USGreenwood Genetic Center · USNagoya University · JPSoochow University · CNUniversity of Georgia · USWashington University in St. Louis · US

Funding

Pilot ProjectP30GM114731 · NIGMS · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI MCEVER, RODGER PAUL · 2016 to 2020
$6.5M
Role of Mucin-type O-glycans in Intestinal InflammationR01DK085691 · NIDDK · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI David Casero, Lijun Xia · 2010 to 2026
$6.2M
Quantitative Analysis Core P30GM110766 · NIGMS · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI GAFFNEY, PATRICK M · 2014 to 2018
$6.1M
TNFAIP3 (A20) and Susceptibility to Systemic Lupus ErythematosusR01AR056360 · NIAMS · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI GAFFNEY, PATRICK M · 2009 to 2018
$6.0M
PATHOGENIC MECHANISMS OF LYSOSOMAL DISEASER01GM086524 · NIGMS · UNIVERSITY OF GEORGIA · PI STEET, RICHARD · 2009 to 2021
$4.0M
Functional Mechanisms of Causal Variants in Systemic Lupus ErythematosusR01AR063124 · NIAMS · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI GAFFNEY, PATRICK M · 2012 to 2016
$2.0M
Podoplanin-mediated platelet activation and vascular integrity in the developing brainR01HD083418 · NICHD · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI XIA, LIJUN · 2015 to 2019
$1.8M
Platelet CLEC-2 regulation of vascular integrity during inflammationR01HL128390 · NHLBI · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI MCEVER, RODGER PAUL, XIA, LIJUN · 2016 to 2019
$1.7M
The Dynamic Range of Site-1 Protease Functions in Skeletal DevelopmentR01AR066590 · NIAMS · WASHINGTON UNIVERSITY · PI PATRA, DEBABRATA, SANDELL, LINDA J · 2015 to 2019
$1.7M
Pathogenic Mechanisms of Lysosomal DiseaseR01NS128907 · NINDS · GREENWOOD GENETIC CENTER · PI STEET, RICHARD · 2022 to 2025
$1.2M
NHLBI NIH HHS R01 HL128390NIAMS NIH HHS R01 AR056360NIAMS NIH HHS R01 AR063124NIAMS NIH HHS R01 AR066590NICHD NIH HHS R01 HD083418NIDDK NIH HHS R01 DK085691NIGMS NIH HHS P30 GM110766NIGMS NIH HHS P30 GM114731NIGMS NIH HHS R01 GM086524NINDS NIH HHS R01 NS128907
6 · The paper itself

Abstract

Site-1 protease (S1P), encoded by MBTPS1, is a serine protease in the Golgi. S1P regulates lipogenesis, endoplasmic reticulum (ER) function, and lysosome biogenesis in mice and in cultured cells. However, how S1P differentially regulates these diverse functions in humans has been unclear. In addition, no human disease with S1P deficiency has been identified. Here, we report a pediatric patient with an amorphic and a severely hypomorphic mutation in MBTPS1. The unique combination of these mutations results in a frequency of functional MBTPS1 transcripts of approximately 1%, a finding that is associated with skeletal dysplasia and elevated blood lysosomal enzymes. We found that the residually expressed S1P is sufficient for lipid homeostasis but not for ER and lysosomal functions, especially in chondrocytes. The defective S1P function specifically impairs activation of the ER stress transducer BBF2H7, leading to ER retention of collagen in chondrocytes. S1P deficiency also causes abnormal secretion of lysosomal enzymes due to partial impairment of mannose-6-phosphate-dependent delivery to lysosomes. Collectively, these abnormalities lead to apoptosis of chondrocytes and lysosomal enzyme-mediated degradation of the bone matrix. Correction of an MBTPS1 variant or reduction of ER stress mitigated collagen-trafficking defects. These results define a new congenital human skeletal disorder and, more importantly, reveal that S1P is particularly required for skeletal development in humans. Our findings may also lead to new therapies for other genetic skeletal diseases, as ER dysfunction is common in these disorders.

Indexed as

Protein TransportApoptosisBasic-Leucine Zipper Transcription FactorsBone Diseases, DevelopmentalCell Culture TechniquesChild, PreschoolChondrocytesCollagenEndoplasmic ReticulumFemaleGene Knockdown TechniquesGenetic Diseases, InbornGolgi ApparatusHomeostasisHumansLipogenesisBasic-Leucine Zipper Transcription FactorsCollagenCREB3L2 protein, humanmannose-6-phosphateMannosephosphatesmembrane-bound transcription factor peptidase, site 1Proprotein ConvertasesSerine EndopeptidasesCell BiologyGenetic diseasesGeneticsGlycobiologyProteases

Identifiers

PMID30046013
PMCPMC6124414
OpenAlexW2884730027

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.