Evidence map›Paper›PMID 30045982›Full record

ArticleJournal of virology2018

Sera from Individuals with Narrowly Focused Influenza Virus Antibodies Rapidly Select Viral Escape Mutations

Amy K F Davis, Kevin McCormick, Megan E Gumina, Joshua G Petrie, Emily T Martin, Katherine S Xue, Jesse D Bloom, Arnold S Monto, Frederic D Bushman, Scott E Hensley

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Amy K F DavisDepartment of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Kevin McCormickDepartment of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Megan E GuminaDepartment of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Joshua G PetrieDepartment of Epidemiology, University of Michigan School of Public Health, Ann Arbor, Michigan, USA.
Emily T MartinDepartment of Epidemiology, University of Michigan School of Public Health, Ann Arbor, Michigan, USA.
Katherine S XueDivision of Basic Sciences and Computational Biology Program, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Jesse D BloomDivision of Basic Sciences and Computational Biology Program, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.ORCID https://orcid.org/0000-0003-1267-3408
Arnold S MontoDepartment of Epidemiology, University of Michigan School of Public Health, Ann Arbor, Michigan, USA.
Frederic D BushmanDepartment of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Scott E HensleyDepartment of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA hensley@pennmedicine.upenn.edu.
University of Pennsylvania · USUniversity of Michigan · USUniversity of Washington · US

Funding

Core_plus_Option_A_B_Proposal for Influenza Vaccine Effectiveness ResearchU01IP000474 · IP · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MONTO, ARNOLD S · 2011 to 2015
$6.2M
Impact of prior influenza exposures on antibody repertoires to new viral strainsR01AI108686 · NIAID · WISTAR INSTITUTE · PI HENSLEY, SCOTT ERIC · 2014 to 2022
$3.7M
The effect of human pre-exposure history on antigenic drift of influenza virusesR01AI113047 · NIAID · WISTAR INSTITUTE · PI HENSLEY, SCOTT ERIC · 2014 to 2018
$2.5M
High-throughput experiments to guide influenza vaccine strain selectionR01AI127893 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BLOOM, JESSE D · 2016 to 2020
$2.1M
Household Studies of Influenza and Other Respiratory Viruses - Supplement: EV D68 SurveillanceR01AI097150 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MONTO, ARNOLD S, OHMIT, SUZANNE · 2012 to 2015
$2.0M
FHCRC High-Performance Computing ClusterS10OD020069 · OD · FRED HUTCHINSON CANCER RESEARCH CENTER · PI KOOPERBERG, CHARLES L · 2015 to 2015
$600k
Household Studies of Influenza and Other Respiratory VirusesR56AI097150 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GORDON, AUBREE L, MONTO, ARNOLD S · 2016 to 2016
$574k
NCIRD CDC HHS U01 IP000474NIAID NIH HHS HHSN272201400005CNIAID NIH HHS R01 AI097150NIAID NIH HHS R01 AI108686NIAID NIH HHS R01 AI113047NIAID NIH HHS R01 AI127893NIAID NIH HHS R56 AI097150NIH HHS S10 OD020069
6 · The paper itself

Abstract

Influenza viruses use distinct antibody escape mechanisms depending on the overall complexity of the antibody response that is encountered. When grown in the presence of a hemagglutinin (HA) monoclonal antibody, influenza viruses typically acquire a single HA mutation that reduces the binding of that specific monoclonal antibody. In contrast, when confronted with mixtures of HA monoclonal antibodies or polyclonal sera that have antibodies that bind several HA epitopes, influenza viruses acquire mutations that increase HA binding to host cells. Recent data from our laboratory and others suggest that some humans possess antibodies that are narrowly focused on HA epitopes that were present in influenza virus strains that they were likely exposed to in childhood. Here, we completed a series of experiments to determine if humans with narrowly focused HA antibody responses are able to select for influenza virus antigenic escape variants

Indexed as

MutationAnimalsAntibodies, NeutralizingAntibodies, ViralAntigenic VariationAntigens, ViralChick EmbryoEpitopesGene ExpressionHemagglutination Inhibition TestsHemagglutinin Glycoproteins, Influenza VirusHumansImmune EvasionImmune SeraInfluenza A Virus, H1N1 SubtypeInfluenza, HumanAntibodies, NeutralizingAntibodies, ViralAntigens, ViralEpitopesHemagglutinin Glycoproteins, Influenza VirusImmune Seraantibodyinfluenzamutation

Identifiers

PMID30045982
PMCPMC6146816
OpenAlexW2953244021

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.