Evidence map›Paper›PMID 30044836›Full record

ArticlePloS one2018

Rapid sample preparation with Lyse-It® for Listeria monocytogenes and Vibrio cholerae.

Tonya M Santaus, Shan Li, Paula Ladd, Amanda Harvey, Shannon Cole, O Colin Stine, Chris D Geddes

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Tonya M SantausUniversity of Maryland, Baltimore County, Chemistry and Biochemistry Department, Baltimore, MD, United States of America.ORCID 0000-0002-8643-2343
Shan LiUniversity of Maryland School of Medicine, Epidemiology and Public Health Department, Baltimore, MD, United States of America.ORCID 0000-0002-3200-0393
Paula LaddUniversity of Maryland, Baltimore County, Chemistry and Biochemistry Department, Baltimore, MD, United States of America.
Amanda HarveyUniversity of Maryland, Baltimore County, Chemistry and Biochemistry Department, Baltimore, MD, United States of America.
Shannon ColeUniversity of Maryland, Baltimore County, Chemistry and Biochemistry Department, Baltimore, MD, United States of America.ORCID 0000-0003-1805-1407
O Colin StineUniversity of Maryland School of Medicine, Epidemiology and Public Health Department, Baltimore, MD, United States of America.ORCID 0000-0003-3974-3752
Chris D GeddesUniversity of Maryland, Baltimore County, Chemistry and Biochemistry Department, Baltimore, MD, United States of America.
University of Maryland, Baltimore County · USFluor (United States) · USUniversity of Maryland, Baltimore · US

Funding

Epidemiology and Ecology of Cholera in AfricaR01AI123422 · NIAID · JOHNS HOPKINS UNIVERSITY · PI Amanda Kay Debes, DAVID A SACK · 2017 to 2026
$6.6M
Graduate Training at The Chemistry Biology InterfaceT32GM066706 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI SELEY-RADTKE, KATHERINE L, SMITH, AARON T · 2004 to 2023
$3.3M
NIAID NIH HHS R01 AI123422NIGMS NIH HHS T32 GM066706
6 · The paper itself

Abstract

Sample preparation is a leading bottleneck in rapid detection of pathogenic bacteria. Here, we use Lyse-It® for bacterial cellular lysis, genomic DNA fragmentation, and protein release and degradation for both Listeria monocytogenes and Vibrio cholerae. The concept of Lyse-It® employs a conventional microwave and Lyse-It® slides for intensely focused microwave irradiation onto the sample. High microwave power and a <60 second irradiation time allow for rapid cellular lysis and subsequent intracellular component release. The pathogenic bacteria are identified by quantitative polymerase chain reaction (qPCR), which subsequently demonstrates the viability of DNA for amplification post microwave-induced lysis. Intracellular component release, degradation, and detection of L. monocytogenes and V. cholerae has been performed and shown in this paper. These results demonstrate a rapid, low-cost, and efficient way for bacterial sample preparation on both food and water-borne Gram-positive and -negative organisms alike.

Indexed as

Bacteriological TechniquesListeria monocytogenesVibrio choleraeAnimalsDNA, BacterialMicrowavesPolymerase Chain ReactionSheepTemperatureDNA, Bacterial

Identifiers

PMID30044836
PMCPMC6059484
OpenAlexW2883975293

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.