ArticleGenetics and molecular biology
Network analysis of ABA-dependent and ABA-independent drought responsive genes in Arabidopsis thaliana.
Article in Genetics and molecular biology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers, 2 of them syntheses that pooled it.
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Who cites it
49 citing papers in PubMed, 2 syntheses or guidelines pooled it.
- Uncovering core regulators of multi-abiotic stress adaptation in Arabidopsis thaliana through integrative meta-analysis and machine learning with RT-qPCR validation.Scientific reports · 2026Pooled it
- Is Silicon a Panacea for Alleviating Drought and Salt Stress in Crops?Frontiers in plant science · 2020Pooled it
- Molecular docking of the DREB(A-6) group and enhanced thermotolerance in potato by overexpressing the DREB(A-6) gene.Journal of plant research · 2026Article
- Antagonistic regulation of nitrogen and drought signaling mediated by NIN-like protein 7 transcription factor inProceedings of the National Academy of Sciences of the United States of America · 2026Article
- Integrated transcriptomic and metabolomic analysis of provenances and organ-specific responses to drought and rehydration inFrontiers in plant science · 2026Article
- Salinity Tolerance in Wheat: Mechanisms and Breeding Approaches.Plants (Basel, Switzerland) · 2025Review
- NAC transcription factors are key regulators of Brassinolide-Enhanced drought tolerance in Camellia oil tree.BMC plant biology · 2025Article
- Comparative Physiological, Biochemical, and Leaf Proteome Responses of Contrasting Wheat Varieties to Drought Stress.Plants (Basel, Switzerland) · 2024Article
- Comparative Stem Transcriptome Analysis Reveals Pathways Associated with Drought Tolerance in Maritime Pine Grafts.International journal of molecular sciences · 2024Article
- How Do Plant Growth-Promoting Bacteria Use Plant Hormones to Regulate Stress Reactions?Plants (Basel, Switzerland) · 2024Review
- Master Regulatory Transcription Factors in β-Aminobutyric Acid-Induced Resistance (BABA-IR): A Perspective on Phytohormone Biosynthesis and Signaling inInternational journal of molecular sciences · 2024Article
- BcSRC2 interacts with BcAPX4 to increase ascorbic acid content for responding ABA signaling and drought stress in pak choi.Horticulture research · 2024Article
- Comparative Effects of Water Scarcity on the Growth and Development of Two Common Bean (Plants (Basel, Switzerland) · 2024Article
- Understanding the impacts of drought on peanutsFrontiers in genetics · 2024Review
- Gene duplications facilitate C4-CAM compatibility in common purslane.Plant physiology · 2023Article
- Regulation of Flowering Time by Environmental Factors in Plants.Plants (Basel, Switzerland) · 2023Review
- Abscisic acid in plants under abiotic stress: crosstalk with major phytohormones.Plant cell reports · 2023Review
- Article
- Characterization of ZmPMP3g function in drought tolerance of maize.Scientific reports · 2023Article
- Changes in physio-biochemical parameters and expression of metallothioneins in Avena sativa L. in response to drought.Scientific reports · 2023Article
Corrections and comments
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Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Drought is one of the most severe abiotic factors restricting plant growth and yield. Numerous genes functioning in drought response are regulated by abscisic acid (ABA) dependent and independent pathways, but knowledge of interplay between the two pathways is still limited. Here, we integrated transcriptome sequencing and network analyses to explore interplays between ABA-dependent and ABA-independent pathways responding to drought stress in Arabidopsis thaliana. We identified 211 ABA-dependent differentially expressed genes (DEGs) and 1,118 ABA-independent DEGs under drought stress. Functional analysis showed that ABA-dependent DEGs were significantly enriched in expected biological processes in response to water deprivation and ABA stimulus, while ABA-independent DEGs were preferentially enriched in response to jasmonic acid (JA), salicylic acid (SA) and gibberellin (GA) stimuli. We found significantly enriched interactions between ABA-dependent and ABA-independent pathways with 94 genes acting as core interacting components by combining network analyses. A link between ABA and JA signaling mediated through a direct interaction of the ABA responsive elements-binding factor ABF3 with the basic helix-loop-helix transcription factor MYC2 was validated by yeast two-hybrid and bimolecular fluorescence complementation (BiFC) assays. Our study provides a systematic view of the interplay between ABA-dependent and ABA-independent pathways in response to drought stress.
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Registered trials
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