Evidence map›Paper›PMID 30042437›Full record

ArticleScientific reports2018

Integrated Platform for Monitoring Single-cell MAPK Kinetics in Computer-controlled Temporal Stimulations.

Hyunryul Ryu, Minhwan Chung, Jiyoung Song, Sung Sik Lee, Olivier Pertz, Noo Li Jeon

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Signalling dynamics in embryonic development.The Biochemical journal · 2021
    Review
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 3 countries.

Hyunryul RyuResearch Laboratory of Electronics, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA, 02139, USA.
Minhwan ChungDepartment of Mechanical Engineering, Seoul National University, Seoul, 151-742, Republic of Korea.
Jiyoung SongDepartment of Mechanical Engineering, Seoul National University, Seoul, 151-742, Republic of Korea.
Sung Sik LeeScopeM (Scientific Center of Optical and Eletron Microscopy), ETH Zurich, Otto-Stern-Weg 3, CH-8093, Zurich, Switzerland.
Olivier PertzInstitute of Cell Biology, University of Bern, Baltzerstrasse 4, 3012, Bern, Switzerland.
Noo Li JeonDepartment of Mechanical Engineering, Seoul National University, Seoul, 151-742, Republic of Korea. njeon@snu.ac.kr.
Seoul National University · KRETH Zurich · CHMassachusetts Institute of Technology · USUniversity of Bern · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Extracellular response kinase (ERK) is one of the key regulator of cell fate, such as proliferation, differentiation and cell migration. Here, we propose a novel experimental pipeline to learn ERK kinetics by temporal growth factor (GF) stimulation. High signal-to-noise ratio of genetically encoded Fluorescence resonance energy transfer (FRET) biosensor enables to get a large number of single-cell ERK activity at each time point, while computer-controlled microfluidics fine-tune the temporal stimulation. Using this platform, we observed that static Epidermal growth factor (EGF) stimulation led to transient ERK activation with a significant cell-to-cell variation, while dynamic stimulation of 3' EGF pulse led to faster adaptation kinetics with no discrepancy. Multiple EGF pulses retriggered ERK activity with respect to frequency of stimulation. We also observed oscillation of ERK activity of each cell at basal state. Introducing of Mitogen-activated protein kinase kinase (MEK) inhibitor, U0126, was not only dropping the average of basal activity for 7.5%, but also diminishing oscillatory behavior. Activity level raised up when inhibitor was removed, followed by transient peak of ERK kinetics. We expect this platform to probe Mitogen-associated protein kinase (MAPK) signaling network for systems biology research at single cellular level.

Indexed as

Biosensing TechniquesButadienesCell DifferentiationCell ProliferationEpidermal Growth FactorFluorescence Resonance Energy TransferHEK293 CellsHumansKineticsMAP Kinase Signaling SystemMitogen-Activated Protein Kinase KinasesModels, TheoreticalNitrilesSingle-Cell AnalysisButadienesEpidermal Growth FactorMitogen-Activated Protein Kinase KinasesNitrilesU 0126

Identifiers

PMID30042437
PMCPMC6057930
OpenAlexW2884499882

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.