Evidence map›Paper›PMID 30041461›Full record

ReviewMarine drugs2018

Extending the "One Strain Many Compounds" (OSMAC) Principle to Marine Microorganisms.

Stefano Romano, Stephen A Jackson, Sloane Patry, Alan D W Dobson

Abstract readReview
In one paragraph

Review in Marine drugs, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 162 papers.

0numbers the graph read from it
0cells of the map it votes in
162citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

162 citing papers in PubMed.

  1. Article
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  11. Actinomycetes in the spotlight: biodiversity and their role in bioremediation.World journal of microbiology & biotechnology · 2026
    Review
  12. Review
  13. Isolation of Three New Diketopiperazine Alkaloids fromMolecules (Basel, Switzerland) · 2026
    Article
  14. Article
  15. Review
  16. Article
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  18. Article
  19. Article
  20. Article

102 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Stefano RomanoDivision of Microbial Ecology, Department of Microbiology and Ecosystem Science, Althanstraße 14, 1090 Vienna, Austria. stfn.romano@gmail.com.ORCID 0000-0002-7600-1953
Stephen A JacksonSchool of Microbiology, University College Cork, National University of Ireland, T12 YN60 Cork, Ireland. sjackson@ucc.ie.ORCID 0000-0001-7869-9032
Sloane PatrySchool of Microbiology, University College Cork, National University of Ireland, T12 YN60 Cork, Ireland. sloane.patry@gmail.com.ORCID 0000-0001-8300-5760
Alan D W DobsonSchool of Microbiology, University College Cork, National University of Ireland, T12 YN60 Cork, Ireland. a.dobson@ucc.ie.ORCID 0000-0002-7713-5574

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genomic data often highlights an inconsistency between the number of gene clusters identified using bioinformatic approaches as potentially producing secondary metabolites and the actual number of chemically characterized secondary metabolites produced by any given microorganism. Such gene clusters are generally considered as "silent", meaning that they are not expressed under laboratory conditions. Triggering expression of these "silent" clusters could result in unlocking the chemical diversity they control, allowing the discovery of novel molecules of both medical and biotechnological interest. Therefore, both genetic and cultivation-based techniques have been developed aimed at stimulating expression of these "silent" genes. The principles behind the cultivation based approaches have been conceptualized in the "one strain many compounds" (OSMAC) framework, which underlines how a single strain can produce different molecules when grown under different environmental conditions. Parameters such as, nutrient content, temperature, and rate of aeration can be easily changed, altering the global physiology of a microbial strain and in turn significantly affecting its secondary metabolism. As a direct extension of such approaches, co-cultivation strategies and the addition of chemical elicitors have also been used as cues to activate "silent" clusters. In this review, we aim to provide a focused and comprehensive overview of these strategies as they pertain to marine microbes. Moreover, we underline how changes in some parameters which have provided important results in terrestrial microbes, but which have rarely been considered in marine microorganisms, may represent additional strategies to awaken "silent" gene clusters in marine microbes. Unfortunately, the empirical nature of the OSMAC approach forces scientists to perform extensive laboratory experiments. Nevertheless, we believe that some computation and experimental based techniques which are used in other disciplines, and which we discuss; could be effectively employed to help streamline the OSMAC based approaches. We believe that natural products discovery in marine microorganisms would be greatly aided through the integration of basic microbiological approaches, computational methods, and technological innovations, thereby helping unearth much of the as yet untapped potential of these microorganisms.

Indexed as

AnimalsAquatic OrganismsBiological ProductsGenomeHumansMultigene FamilySecondary MetabolismBiological Productsbiosynthetic gene clusterschemical elicitorsco-cultivationcultivationenvironmental cuesone strain many compoundsOSMACsecondary metabolites

Identifiers

PMID30041461
PMCPMC6070831

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.