Evidence map›Paper›PMID 30041440›Full record

ArticleAnimals : an open access journal from MDPI2018

Identification and Characterization of Long Noncoding RNAs in Ovine Skeletal Muscle.

Qing Li, Ruizao Liu, Huijing Zhao, Ran Di, Zengkui Lu, Enmin Liu, Yuqin Wang, Mingxing Chu, Caihong Wei

Open access · goldAbstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.1field-weighted citation impact, top 58% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Qing LiInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China. liqing_0507@163.com.ORCID 0000-0002-3666-9879
Ruizao LiuInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China. rzliu1988@sina.com.
Huijing ZhaoInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China. zhhj1998927@163.com.
Ran DiInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China. dirangirl@163.com.
Zengkui LuInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China. 15294157518@163.com.
Enmin LiuInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China. hardliubut@163.com.
Yuqin WangCollege of Animal Science and Technology, Henan University of Science and Technology, Luoyang 471023, China. wangyq6836@163.com.
Mingxing ChuInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China. mxchu@263.net.
Caihong WeiInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China. weicaihong@caas.cn.
Chinese Academy of Agricultural Sciences · CNGansu Agricultural University · CNHenan University of Science and Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Long noncoding RNAs (lncRNAs) are increasingly being recognized as key regulators in many cellular processes. However, few reports of them in livestock have been published. Here, we describe the identification and characterization of lncRNAs in ovine skeletal muscle. Eight libraries were constructed from the gastrocnemius muscle of fetal (days 85 and 120), newborn and adult Texel and Ujumqin sheep. The 2002 identified transcripts shared some characteristics, such as their number of exons, length and distribution. We also identified some coding genes near these lncRNA transcripts, which are particularly associated with transcriptional regulation- and development-related processes, suggesting that the lncRNAs are associated with muscle development. In addition, in pairwise comparisons between the libraries of the same stage in different breeds, a total of 967 transcripts were differentially expressed but just 15 differentially expressed lncRNAs were common to all stages. Among them, we found that TCONS_00013201 exhibited higher expression in Ujumqin samples, while TCONS_00006187 and TCONS_00083104 were higher in Texel samples. Moreover, TCONS_00044801, TCONS_00008482 and TCONS_00102859 were almost completely absent from Ujumqin samples. Our results suggest that differences in the expression of these lncRNAs may be associated with the muscular differences observed between Texel and Ujumqin sheep breeds.

Indexed as

differential expressionlncRNAmuscle developmentsheep

Identifiers

PMID30041440
PMCPMC6071021
OpenAlexW2884597988

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.