Evidence map›Paper›PMID 30040978›Full record

ArticleVirus research2018

Identification and genomic characterization of a novel CRESS DNA virus from a calf with severe hemorrhagic enteritis in China.

Zijing Guo, Qifu He, Cheng Tang, Bin Zhang, Hua Yue

Open access · greenAbstract readCase Reports
In one paragraph

Article in Virus research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 46 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Zijing GuoCollege of Life Science and Technology, Southwest University for Nationalities, Chengdu, China.
Qifu HeCollege of Life Science and Technology, Southwest University for Nationalities, Chengdu, China.
Cheng TangCollege of Life Science and Technology, Southwest University for Nationalities, Chengdu, China.
Bin ZhangCollege of Life Science and Technology, Southwest University for Nationalities, Chengdu, China.
Hua YueCollege of Life Science and Technology, Southwest University for Nationalities, Chengdu, China. Electronic address: yhua900@163.com.
Southwest Minzu University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, a novel circular replication-associated protein (Rep)-encoding single stranded (CRESS) DNA virus was discovered in diarrheic sample of a calf with severe hemorrhagic enteritis. The virus, named Bo-Circo-like virus CH, has a circular genome with 3909 nucleotides (nt). Six putative open reading frames (ORFs) were identified, including Rep, capsid (Cap) and four proteins of unknown function. Both the genome size and the number as well as the organization of encoded ORFs, Bo-Circo-like virus CH is most closely related to Po-Circo-like virus 21 detected in pig faeces. A preliminary survey using specific primers for the Rep region showed that 5.3% (4/75) of diarrheic samples were positive for Bo-Circo-like virus, and all 42 healthy samples were negative. In conclusion, our results indicate that Bo-Circo-like virus CH may represent a new virus in bovine. Further investigation is needed to determine the relationship between the virus infection and diarrhea.

Indexed as

PhylogenyAnimalsBase CompositionCattleCattle DiseasesChinaDNA, CircularDNA, Single-StrandedDNA VirusesDNA Virus InfectionsEnteritisFecesGenome SizeGenome, ViralMetagenomicsOpen Reading FramesDNA, CircularDNA, Single-StrandedViral ProteinsCattleGenomeHemorrhagic enteritisNovel circular Rep-encodingssDNAVirus

Identifiers

PMID30040978
PMCPMC7114660
OpenAlexW2884386941

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.