Evidence map›Paper›PMID 30040865›Full record

ArticlePloS one2018

Translational proteomic study to address host protein changes during aspergillosis.

Guillaume Desoubeaux, David Chauvin, Maria Del Carmen Piqueras, Ellen Bronson, Sanjoy K Bhattacharya, Gayle Sirpenski, Eric Bailly, Carolyn Cray

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Guillaume DesoubeauxUniversity of Miami, Division of Comparative Pathology, Department of Pathology & Laboratory Medicine, Miller School of Medicine, Miami, FL, United States of America.ORCID 0000-0001-7945-9890
David ChauvinUniversité de Tours, CEPR-INSERM U1100 / Équipe 3, Faculté de Médecine, Tours, France.
Maria Del Carmen PiquerasUniversity of Miami, Mass Spectrometry Core Facility, Miller School of Medicine, Miami, FL, United States of America.
Ellen BronsonMaryland Zoo in Baltimore, Baltimore, MD, United States of America.
Sanjoy K BhattacharyaUniversity of Miami, Mass Spectrometry Core Facility, Miller School of Medicine, Miami, FL, United States of America.
Gayle SirpenskiMystic Aquarium, Mystic, CT, United States of America.
Eric BaillyCHU de Tours, Parasitologie, Mycologie, Médecine tropicale, Tours, France.
Carolyn CrayUniversity of Miami, Division of Comparative Pathology, Department of Pathology & Laboratory Medicine, Miller School of Medicine, Miami, FL, United States of America.
University of Miami · USUniversité de Tours · FRCentre Hospitalier Universitaire de Tours · FRSea Research Foundation · US

Funding

Shared Equipment ModuleP30EY014801 · NEI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI Dmitry V Ivanov · 2004 to 2026
$12.2M
NEI NIH HHS P30 EY014801
6 · The paper itself

Abstract

Aspergillosis is a fungal disease due to Aspergillus molds that can affect both humans and animals. As routine diagnosis remains difficult, improvement of basic knowledge with respect to its pathophysiology is critical to search for new biomarkers of infection and new therapeutic targets. Large-scale proteomics allows assessment of protein changes during various disease processes. In the present study, mass spectrometry iTRAQ® (isobaric tags for relative and absolute quantitation) protocol was used for direct identification and relative quantitation of host proteins in diseased fluids and tissues collected from an experimental rat model challenged with Aspergillus, as well as in blood obtained from naturally-infected penguins. In all, mass spectrometry analysis revealed that proteome during aspergillosis was mostly represented by proteins that usually express role in metabolic processes and biological process regulation. Ten and 17 proteins were significantly ≥4.0-fold overrepresented in blood of Aspergillus-diseased rats and penguins, respectively, while five and 39 were negatively ≥4.0-fold depleted within the same samples. In rat lungs, 33 proteins were identified with positive or negative relative changes versus controls and were quite different from those identified in the blood. Except for some zinc finger proteins, kinases, and histone transferases, and while three pathways were common (Wnt, cadherin and FGF), great inter-species variabilities were observed regarding the identity of the differentially-represented proteins. Thus, this finding confirmed how difficult it is to define a unique biomarker of infection. iTRAQ® protocol appears as a convenient proteomic tool that is greatly suited to ex vivo exploratory studies and should be considered as preliminary step before validation of new diagnostic markers and new therapeutic targets in humans.

Indexed as

Host-Pathogen InteractionsAnimalsAspergillosisBiomarkersCadherinsFibroblast Growth FactorsHumansMaleMass SpectrometryProtein Processing, Post-TranslationalProteinsProteomeProteomicsRatsSpheniscidaeTranscriptomeBiomarkersCadherinsFibroblast Growth FactorsProteinsProteomeWnt Proteins

Identifiers

PMID30040865
PMCPMC6057647
OpenAlexW2884163519

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.