Evidence map›Paper›PMID 30040837›Full record

ArticlePloS one2018

Characterization of circulating RSV strains among subjects in the OUTSMART-RSV surveillance program during the 2016-17 winter viral season in the United States.

Alexey Ruzin, Susan T Pastula, Elizabeth Levin-Sparenberg, Xiaohui Jiang, Jon Fryzek, Andrey Tovchigrechko, Bin Lu, Yanping Qi, Hui Liu, Hong Jin and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 28 citations in OpenAlex.

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  17. Epidemiology, Risk Factors, and Outcomes of Respiratory Syncytial Virus Infections in Newborns in Bamako, Mali.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Alexey RuzinAstraZeneca/MedImmune, Gaithersburg, Maryland, United States of America.
Susan T PastulaEpidstat Institute, Ann Arbor, Michigan, United States of America.
Elizabeth Levin-SparenbergEpidstat Institute, Ann Arbor, Michigan, United States of America.ORCID 0000-0002-2231-3361
Xiaohui JiangEpidstat Institute, Ann Arbor, Michigan, United States of America.
Jon FryzekEpidstat Institute, Ann Arbor, Michigan, United States of America.
Andrey TovchigrechkoAstraZeneca/MedImmune, Gaithersburg, Maryland, United States of America.
Bin LuAstraZeneca/MedImmune, Mountain View, California, United States of America.
Yanping QiAstraZeneca/MedImmune, Mountain View, California, United States of America.
Hui LiuAstraZeneca/MedImmune, Mountain View, California, United States of America.
Hong JinAstraZeneca/MedImmune, Mountain View, California, United States of America.
Li YuAstraZeneca/MedImmune, Gaithersburg, Maryland, United States of America.
Judith HackettAstraZeneca/MedImmune, Gaithersburg, Maryland, United States of America.
Tonya VillafanaAstraZeneca/MedImmune, Gaithersburg, Maryland, United States of America.
Mark T EsserAstraZeneca/MedImmune, Gaithersburg, Maryland, United States of America.
AstraZeneca (United States) · USMichigan United · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRespiratory syncytial virus (RSV) is an established cause of serious lower respiratory disease in infants, elderly and high-risk populations. The OUTSMART surveillance program aims to characterize patient populations and currently circulating RSV strains, and monitor temporal and geographic evolution of RSV F and G proteins in the U.S.

methodsThe OUTSMART 2016-17 study collected RSV-positive samples from 25 RSVAlert® laboratories from 4 U.S. regions and Puerto Rico during November 2016 through March 2017. Frequencies of A and B subtypes and genotypes were determined for several demographic and geographic variables. To gauge the representativeness of the OUTSMART patients, results were compared to discharge data from the NEDS and NIS databases.

resultsA total of 1,041 RSV-positive samples with associated demographic data were obtained and the RSV F gene and second variable region of the G gene were sequenced. The majority of samples (76.0%) came from children under 2 years old: <1 year (48.4%), 1-2 years (27.6%). The OUTSMART patient sample was similar to NEDS and NIS for age, gender, and geographic location. Both OUTSMART and national RSV cases peaked in January. Of OUTSMART samples, 45.3% were subtype A, 53.7% were subtype B and 1.0% were mixed A and B. The percentage of RSV B cases increased with increasing age. Hospitalization (length of hospital stay, LOS, >24 hrs) occurred in 29.0% of patients of which 52.0% had RSV B. Outpatients (LOS <24 hrs) were 64.4% of total of which 73.3% were diagnosed in the ER and discharged, while only 6% were diagnosed in other outpatient settings.

conclusionsThe OUTSMART 2016-17 study was representative of the U.S. RSV experience. Geographic and temporal information from the RSV surveillance program will be used to establish a molecular baseline of RSV F and G sequence variability and to help inform development of novel agents for RSV prophylaxis and treatment.

Indexed as

AdolescentAdultAge FactorsChildChild, PreschoolFemaleGenes, ViralGenotypeHigh-Throughput Nucleotide SequencingHumansInfantInfant, NewbornMaleMiddle AgedPhylogenyPopulation Surveillance

Identifiers

PMID30040837
PMCPMC6057637
OpenAlexW2884030984

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.