Evidence map›Paper›PMID 30039535›Full record

ArticleMolecular microbiology2018

The Helicobacter pylori cell shape promoting protein Csd5 interacts with the cell wall, MurF, and the bacterial cytoskeleton.

Kris M Blair, Kevin S Mears, Jennifer A Taylor, Jutta Fero, Lisa A Jones, Philip R Gafken, John C Whitney, Nina R Salama

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Distinct regions ofeLife · 2022
    Article
  7. Insights Into the Helical Shape Complex ofFrontiers in microbiology · 2022
    Article
  8. Review
  9. Article
  10. A bacterial cytolinker couples positioning of magnetic organelles to cell shape control.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Kris M BlairDivision of Human Biology, Fred Hutchinson Cancer Research Center, 1100 Fairview Ave, Seattle, WA, 98109, USA.
Kevin S MearsDivision of Human Biology, Fred Hutchinson Cancer Research Center, 1100 Fairview Ave, Seattle, WA, 98109, USA.
Jennifer A TaylorDivision of Human Biology, Fred Hutchinson Cancer Research Center, 1100 Fairview Ave, Seattle, WA, 98109, USA.
Jutta FeroDivision of Human Biology, Fred Hutchinson Cancer Research Center, 1100 Fairview Ave, Seattle, WA, 98109, USA.
Lisa A JonesProteomics Facility, Fred Hutchinson Cancer Research Center, 1100 Fairview Ave. N., DE-352, Seattle, WA, 98109-1024, USA.
Philip R GafkenProteomics Facility, Fred Hutchinson Cancer Research Center, 1100 Fairview Ave. N., DE-352, Seattle, WA, 98109-1024, USA.
John C WhitneyMichael DeGroote Institute for Infectious Disease Research, McMaster University, Hamilton, Ontario, L8S 4K1, Canada.
Nina R SalamaDivision of Human Biology, Fred Hutchinson Cancer Research Center, 1100 Fairview Ave, Seattle, WA, 98109, USA.
Fred Hutch Cancer Center · USMcMaster University · CASeattle Pacific University · USUniversity of Washington · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Marian Esvelt · 1985 to 2026
$296.4M
Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Daniela E Matei · 1993 to 2026
$153.9M
TR&D 7: Cell Specific ProteomicsP41GM108569 · NIGMS · NORTHWESTERN UNIVERSITY · PI KELLEHER, NEIL L · 2015 to 2024
$13.6M
GENETIC REQUIREMENTS OF HELICOBACTER PYLORI INFECTIONR01AI054423 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Nina Salama · 2004 to 2026
$9.5M
Chromosome Metabolism and Cancer Training GrantT32CA009657 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI EISENMAN, ROBERT NEIL · 1991 to 2020
$7.6M
Mechanisms and consequence of helical shape generation in Helicobacter pyloriR01AI136946 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Nina Salama · 2018 to 2026
$4.1M
Elucidation of a bacterial cell shape generating program and pathogenic functionsR01AI094839 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI SALAMA, NINA · 2012 to 2016
$2.1M
NCI NIH HHS P30 CA015704NCI NIH HHS P30 CA060553NCI NIH HHS T32 CA009657NIAID NIH HHS R01 AI054423NIAID NIH HHS R01 AI094839NIAID NIH HHS R01 AI136946NIGMS NIH HHS P41 GM108569
6 · The paper itself

Abstract

Chronic infection with Helicobacter pylori can lead to the development of gastric ulcers and stomach cancers. The helical cell shape of H. pylori promotes stomach colonization. Screens for loss of helical shape have identified several periplasmic peptidoglycan (PG) hydrolases and non-enzymatic putative scaffolding proteins, including Csd5. Both over and under expression of the PG hydrolases perturb helical shape, but the mechanism used to coordinate and localize their enzymatic activities is not known. Using immunoprecipitation and mass spectrometry we identified Csd5 interactions with cytosolic proteins CcmA, a bactofilin required for helical shape, and MurF, a PG precursor synthase, as well as the inner membrane spanning ATP synthase. A combination of Csd5 domain deletions, point mutations, and transmembrane domain chimeras revealed that the N-terminal transmembrane domain promotes MurF, CcmA, and ATP synthase interactions, while the C-terminal SH3 domain mediates PG binding. We conclude that Csd5 promotes helical shape as part of a membrane associated, multi-protein shape complex that includes interactions with the periplasmic cell wall, a PG precursor synthesis enzyme, the bacterial cytoskeleton, and ATP synthase.

Indexed as

Bacterial Outer Membrane ProteinsBacterial ProteinsCell MembraneCell WallCytoskeletonGene DeletionHelicobacter pyloriMitochondrial Proton-Translocating ATPasesN-Acetylmuramoyl-L-alanine AmidasePeptide SynthasesPeriplasmSequence Analysis, ProteinBacterial Outer Membrane ProteinsBacterial ProteinsCcmA protein, bacteriaF1F0-ATP synthaseMitochondrial Proton-Translocating ATPasesN-Acetylmuramoyl-L-alanine AmidasePeptide SynthasesUDP-N-acetylmuramoylalanyl-D-glutamyllysine-D-alanyl-D-alanine ligase

Identifiers

PMID30039535
PMCPMC6195823
OpenAlexW2883113049

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.