Evidence map›Paper›PMID 30039384›Full record

ArticleGenes & genomics2018

Molecular characterization and expression of suppressor of cytokine signaling (SOCS) 1, 2 and 3 under acute hypoxia and reoxygenation in pufferfish, Takifugu fasciatus.

Dan Wang, Xin Wen, Xinyu Zhang, Yadong Hu, Xinru Li, Wenxu Zhu, Tao Wang, Shaowu Yin

Abstract read
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In one paragraph

Article in Genes & genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Dan WangCollege of Life Sciences, College of Marine Sciences and Engineering, Nanjing Normal University, 1 Wenyuan Road, Nanjing, 210023, Jiangsu, China.
Xin WenCollege of Life Sciences, College of Marine Sciences and Engineering, Nanjing Normal University, 1 Wenyuan Road, Nanjing, 210023, Jiangsu, China.
Xinyu ZhangCollege of Life Sciences, College of Marine Sciences and Engineering, Nanjing Normal University, 1 Wenyuan Road, Nanjing, 210023, Jiangsu, China.
Yadong HuCollege of Life Sciences, College of Marine Sciences and Engineering, Nanjing Normal University, 1 Wenyuan Road, Nanjing, 210023, Jiangsu, China.
Xinru LiCollege of Life Sciences, College of Marine Sciences and Engineering, Nanjing Normal University, 1 Wenyuan Road, Nanjing, 210023, Jiangsu, China.
Wenxu ZhuCollege of Life Sciences, College of Marine Sciences and Engineering, Nanjing Normal University, 1 Wenyuan Road, Nanjing, 210023, Jiangsu, China.
Tao WangCollege of Life Sciences, College of Marine Sciences and Engineering, Nanjing Normal University, 1 Wenyuan Road, Nanjing, 210023, Jiangsu, China.
Shaowu YinCollege of Life Sciences, College of Marine Sciences and Engineering, Nanjing Normal University, 1 Wenyuan Road, Nanjing, 210023, Jiangsu, China. yinshaowu@163.com.ORCID 0000-0002-6576-6643
Nanjing Normal University · CN

Funding

Project Foundation of the Academic Program Development of Jiangsu Higher Education Institution PAPDThe National Finance Projects of Agro-technical popularization TG15-003The National Spark Program of China 2015GA690040
6 · The paper itself

Abstract

Hypoxia seriously affects the innate immune system of fish. However, the roles of suppressor of cytokine signaling (SOCS), pivotal anti-inflammatory genes, in response to hypoxia/reoxygenation remain largely unexplored. The primary objective of this study was to elucidate the function of SOCS genes under acute hypoxia and reoxygenation in pufferfish (Takifugu fasciatus). In the present study, SOCS1, 2 and 3 were identified in T. fasciatus referred to as TfSOCS1, 2 and 3. Then, qRT-PCR and western blot analysis were employed to assess their expressions at both the mRNA and protein levels. Tissue distribution demonstrated that the three SOCS genes were predominantly distributed in gill, brain and liver. Under hypoxia challenge (1.63 ± 0.2 mg/L DO for 2, 4, 6 and 8 h), the expressions of TfSOCS1 and 3 in brain and liver at the mRNA and protein levels were significantly decreased, while their expressions showed an opposite trend in gill. Different from the expressions of TfSOCS1 and 3, the expression of TfSOCS2 was inhibited in gill, along with its increased expression in brain and liver. After normoxic recovery (7.0 ± 0.3 mg/L of DO for 4 and 12 h), most of TfSOCS genes were significantly altered at R4 (reoxygenation for 4 h) and returned to the normal level at R12 (reoxygenation for 12 h). SOCS genes played vital roles in response to hypoxia/reoxygenation challenge. Our findings greatly strengthened the relation between innate immune and hypoxia stress in T. fasciatus.

Indexed as

AnimalsFish ProteinsHypoxiaPhylogenyRNA, MessengerSuppressor of Cytokine Signaling 1 ProteinSuppressor of Cytokine Signaling 3 ProteinSuppressor of Cytokine Signaling ProteinsTakifuguTissue DistributionFish ProteinsRNA, MessengerSuppressor of Cytokine Signaling 1 ProteinSuppressor of Cytokine Signaling 3 ProteinSuppressor of Cytokine Signaling ProteinsHypoxiaReoxygenationSOCSTakifugu fasciatus

Identifiers

PMID30039384
OpenAlexW2884393066

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.