Evidence map›Paper›PMID 30037996›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Eda-activated RelB recruits an SWI/SNF (BAF) chromatin-remodeling complex and initiates gene transcription in skin appendage formation.

Jian Sima, Zhijiang Yan, Yaohui Chen, Elin Lehrmann, Yongqing Zhang, Ramaiah Nagaraja, Weidong Wang, Zhong Wang, David Schlessinger

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.4field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
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  7. Article
  8. Ectodysplasin A (EDA) Signaling: From Skin Appendage to Multiple Diseases.International journal of molecular sciences · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Jian SimaLaboratory of Genetics and Genomics, National Institute on Aging/NIH-Intramural Research Program, Baltimore, MD 21224; simajian@gmail.com schlessingerd@grc.nia.nih.gov.
Zhijiang YanLaboratory of Genetics and Genomics, National Institute on Aging/NIH-Intramural Research Program, Baltimore, MD 21224.
Yaohui ChenLaboratory of Genetics and Genomics, National Institute on Aging/NIH-Intramural Research Program, Baltimore, MD 21224.
Elin LehrmannLaboratory of Genetics and Genomics, National Institute on Aging/NIH-Intramural Research Program, Baltimore, MD 21224.
Yongqing ZhangLaboratory of Genetics and Genomics, National Institute on Aging/NIH-Intramural Research Program, Baltimore, MD 21224.
Ramaiah NagarajaLaboratory of Genetics and Genomics, National Institute on Aging/NIH-Intramural Research Program, Baltimore, MD 21224.
Weidong WangLaboratory of Genetics and Genomics, National Institute on Aging/NIH-Intramural Research Program, Baltimore, MD 21224.
Zhong WangDepartment of Cardiac Surgery, Cardiovascular Research Center, University of Michigan, Ann Arbor, MI 48109.
David SchlessingerLaboratory of Genetics and Genomics, National Institute on Aging/NIH-Intramural Research Program, Baltimore, MD 21224; simajian@gmail.com schlessingerd@grc.nia.nih.gov.
National Institute on Aging · USUniversity of Michigan–Ann Arbor · US

Funding

Placenta specific and ribosomal RNA genes: structure and functionZIAAG000646 · NIA · NATIONAL INSTITUTE ON AGING · PI NAGARAJA, RAMAIAH · 2009 to 2025
$12.9M
Investigate the DNA damage response pathway of Fanconi anemia and BRCA proteinsZIAAG000688 · NIA · NATIONAL INSTITUTE ON AGING · PI WANG, WEIDONG · 2009 to 2025
$6.9M
Characterization of a Complex Involved In Rothmund-Thomson SyndromeZIAAG000661 · NIA · NATIONAL INSTITUTE ON AGING · PI WANG, WEIDONG · 2009 to 2019
$6.1M
Epigenetic control of multipotent cardiac progenitor cell differentiationR01HL109054 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WANG, ZHONG · 2012 to 2016
$1.9M
NHLBI NIH HHS R01 HL109054
6 · The paper itself

Abstract

Ectodysplasin A (Eda) signaling activates NF-κB during skin appendage formation, but how Eda controls specific gene transcription remains unclear. Here, we find that Eda triggers the formation of an NF-κB-associated SWI/SNF (BAF) complex in which p50/RelB recruits a linker protein, Tfg, that interacts with BAF45d in the BAF complex. We further reveal that Tfg is initially induced by Eda-mediated RelB activation and then bridges RelB and BAF for subsequent gene regulation. The BAF component BAF250a is particularly up-regulated in skin appendages, and epidermal knockout of BAF250a impairs skin appendage development, resulting in phenotypes similar to those of Eda-deficient mouse models. Transcription profiling identifies several target genes regulated by Eda, RelB, and BAF. Notably, RelB and the BAF complex are indispensable for transcription of Eda target genes, and both BAF complex and Eda signaling are required to open chromatin of Eda targets. Our studies thus suggest that Eda initiates a signaling cascade and recruits a BAF complex to specific gene loci to facilitate transcription during organogenesis.

Indexed as

AnimalsChromatinChromosomal Proteins, Non-HistoneEctodysplasinsEdar ReceptorFemaleGene Expression ProfilingHEK293 CellsHumansMaleMiceMice, Inbred C57BLMice, KnockoutNF-kappa BOrganogenesisProteinsChromatinChromosomal Proteins, Non-HistoneEctodysplasinsEda protein, mouseEdar protein, mouseEdar ReceptorNF-kappa BProteinsRelb protein, mouseRNA, Small InterferingSWI-SNF-B chromatin-remodeling complexTfg protein, mouseTranscription Factor RelBTranscription FactorsVesicular Transport ProteinsBAFchromatin remodelingectodysplasinRelBSWI/SNF

Identifiers

PMID30037996
PMCPMC6094125
OpenAlexW2883419319

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.