Evidence map›Paper›PMID 30037983›Full record

ArticleMolecular and cellular biology2018

An Alzheimer's Disease-Linked Loss-of-Function CLN5 Variant Impairs Cathepsin D Maturation, Consistent with a Retromer Trafficking Defect.

Yasir H Qureshi, Vivek M Patel, Diego E Berman, Milankumar J Kothiya, Jessica L Neufeld, Badri Vardarajan, Min Tang, Dolly Reyes-Dumeyer, Rafael Lantigua, Martin Medrano and 3 more

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Unifying biology of neurodegeneration in lysosomal storage diseases.Journal of inherited metabolic disease · 2025
    Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 3 countries.

Yasir H QureshiThe Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, New York, USA.
Vivek M PatelThe Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, New York, USA.
Diego E BermanThe Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, New York, USA.
Milankumar J KothiyaThe Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, New York, USA.
Jessica L NeufeldThe Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, New York, USA.
Badri VardarajanThe Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, New York, USA.
Min TangThe Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, New York, USA.
Dolly Reyes-DumeyerThe Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, New York, USA.
Rafael LantiguaDepartment of Medicine, Columbia University, New York, New York, USA.
Martin MedranoSchool of Medicine, Pontificia Universidad Catolica Madre y Maestra, Santiago, Dominican Republic.
Ivonne J Jiménez-VelázquezDepartment of Internal Medicine, University of Puerto Rico School of Medicine, San Juan, Puerto Rico.
Scott A SmallThe Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, New York, USA sas68@cumc.columbia.edu cr2101@cumc.columbia.edu.
Christiane ReitzThe Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, New York, USA sas68@cumc.columbia.edu cr2101@cumc.columbia.edu.
Columbia University · USPontificia Universidad Católica Madre y Maestra · DOUniversity of Puerto Rico System · PR

Funding

Satellite Diagnostic and Treatment Clinic CoreP50AG008702 · NIA · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI DE JAGER, PHILIP L · 1989 to 2019
$46.3M
Genetic Epidemiology of Early-Onset Alzheimers disease in Caribbean Hispanics and non-Hispanic WhitesRF1AG054080 · NIA · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI BEECHAM, GARY WAYNE, REITZ, CHRISTIANE · 2016 to 2018
$4.0M
Genetic Studies of Alzheimer's Disease in Caribbean HispanicsRF1AG015473 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MAYEUX, RICHARD P · 2015 to 2018
$3.3M
NIA NIH HHS P50 AG008702NIA NIH HHS RF1 AG015473NIA NIH HHS RF1 AG054080
6 · The paper itself

Abstract

In a whole-exome sequencing study of multiplex Alzheimer's disease (AD) families, we investigated three neuronal ceroid lipofuscinosis genes that have been linked to retromer, an intracellular trafficking pathway associated with AD: ceroid lipofuscinosis 3 (CLN3), ceroid lipofuscinosis 5 (CLN5), and cathepsin D (CTSD). We identified a missense variant in CLN5 c.A959G (p.Asn320Ser) that segregated with AD. We find that this variant causes glycosylation defects in the expressed protein, which causes it to be retained in the endoplasmic reticulum with reduced delivery to the endolysosomal compartment, CLN5's normal cellular location. The AD-associated CLN5 variant is shown here to reduce the normal processing of cathepsin D and to decrease levels of full-length amyloid precursor protein (APP), suggestive of a defect in retromer-dependent trafficking.

Indexed as

Loss of Function MutationAlzheimer DiseaseAmino Acid SequenceAmyloid beta-Protein PrecursorCathepsin DEndoplasmic ReticulumEndosomesExome SequencingGlycosylationHeLa CellsHumansLysosomal Membrane ProteinsLysosomesMembrane GlycoproteinsMembrane ProteinsMolecular ChaperonesAmyloid beta-Protein PrecursorCathepsin DCLN3 protein, humanCLN5 protein, humanCTSD protein, humanLysosomal Membrane ProteinsMembrane GlycoproteinsMembrane ProteinsMolecular ChaperonesAlzheimer's diseaseCLN5endosomesNCLretromer

Identifiers

PMID30037983
PMCPMC6168984
OpenAlexW2884267636

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.