Evidence map›Paper›PMID 30035712›Full record

ArticleeLife2018

Gating mechanisms during actin filament elongation by formins.

Fikret Aydin, Naomi Courtemanche, Thomas D Pollard, Gregory A Voth

Abstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Article
  3. Molecular mechanism of Arp2/3 complex activation by nucleation-promoting factors and an actin monomer.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Fikret AydinDepartment of Chemistry, The University of Chicago, Chicago, United States.ORCID 0000-0003-3237-8043
Naomi CourtemancheDepartment of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, United States.
Thomas D PollardDepartment of Molecular, Cellular and Developmental Biology, Yale University, New Haven, United States.ORCID 0000-0002-1785-2969
Gregory A VothDepartment of Chemistry, The University of Chicago, Chicago, United States.ORCID 0000-0002-3267-6748

Funding

MOLECULAR MECHANISMS OF CELLULAR MOTILITYR01GM026338 · NIGMS · YALE UNIVERSITY · PI POLLARD, THOMAS D. · 1985 to 2020
$9.8M
Molecular mechanisms of bundled actin structure assembly by forminsR01GM122787 · NIGMS · UNIVERSITY OF MINNESOTA · PI Naomi Courtemanche · 2017 to 2026
$2.7M
National Science Foundation Materials Research Science and Engineering Center DMR-14207090NIGMS NIH HHS R01 GM026338NIGMS NIH HHS R01GM026338NIGMS NIH HHS R01 GM122787NIGMS NIH HHS R01GM122787
6 · The paper itself

Abstract

Formins play an important role in the polymerization of unbranched actin filaments, and particular formins slow elongation by 5-95%. We studied the interactions between actin and the FH2 domains of formins Cdc12, Bni1 and mDia1 to understand the factors underlying their different rates of polymerization. All-atom molecular dynamics simulations revealed two factors that influence actin filament elongation and correlate with the rates of elongation. First, FH2 domains can sterically block the addition of new actin subunits. Second, FH2 domains flatten the helical twist of the terminal actin subunits, making the end less favorable for subunit addition. Coarse-grained simulations over longer time scales support these conclusions. The simulations show that filaments spend time in states that either allow or block elongation. The rate of elongation is a time-average of the degree to which the formin compromises subunit addition rather than the formin-actin complex literally being in 'open' or 'closed' states.

Indexed as

Actin CytoskeletonActinsAnimalsCarrier ProteinsCell Cycle ProteinsCrystallography, X-RayCytoskeletal ProteinsCytoskeletonForminsMiceMicrofilament ProteinsMolecular Dynamics SimulationMultiprotein ComplexesProtein BindingProtein ConformationProtein DomainsActinsBni1 protein, S cerevisiaeCarrier ProteinsCDC12 protein, S cerevisiaeCell Cycle ProteinsCytoskeletal ProteinsDiap1 protein, mouseForminsMicrofilament ProteinsMultiprotein ComplexesSaccharomyces cerevisiae Proteinscoarse-grainedFH2 domainformingating mechanismintermolecular interactionsmolecular biophysicsmolecular dynamicsmouseS. cerevisiaeS. pombestructural biology

Identifiers

PMID30035712
PMCPMC6056239

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.