Evidence map›Paper›PMID 30033361›Full record

ArticleCell2018

Biology and Clinical Implications of the 19q13 Aggressive Prostate Cancer Susceptibility Locus.

Ping Gao, Ji-Han Xia, Csilla Sipeky, Xiao-Ming Dong, Qin Zhang, Yuehong Yang, Peng Zhang, Sara Pereira Cruz, Kai Zhang, Jing Zhu and 15 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 102 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
102citing papers in PubMed, 1 pooled it
14.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

102 citing papers in PubMed, 1 synthesis or guideline pooled it, 166 citations in OpenAlex.

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42 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

25 authors at 9 institutions in 3 countries.

Ping GaoBiocenter Oulu, Faculty of Biochemistry and Molecular Medicine, University of Oulu, 90014 Oulu, Finland.
Ji-Han XiaBiocenter Oulu, Faculty of Biochemistry and Molecular Medicine, University of Oulu, 90014 Oulu, Finland.
Csilla SipekyInstitute of Biomedicine, University of Turku, 20014 Turku, Finland.
Xiao-Ming DongBiocenter Oulu, Faculty of Biochemistry and Molecular Medicine, University of Oulu, 90014 Oulu, Finland.
Qin ZhangBiocenter Oulu, Faculty of Biochemistry and Molecular Medicine, University of Oulu, 90014 Oulu, Finland.
Yuehong YangBiocenter Oulu, Faculty of Biochemistry and Molecular Medicine, University of Oulu, 90014 Oulu, Finland.
Peng ZhangDepartment of Pathology, MCW Cancer Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Sara Pereira CruzBiocenter Oulu, Faculty of Biochemistry and Molecular Medicine, University of Oulu, 90014 Oulu, Finland.
Kai ZhangBiocenter Oulu, Faculty of Biochemistry and Molecular Medicine, University of Oulu, 90014 Oulu, Finland.
Jing ZhuDepartment of Pathology, MCW Cancer Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Hang-Mao LeeBiocenter Oulu, Faculty of Biochemistry and Molecular Medicine, University of Oulu, 90014 Oulu, Finland.
Sufyan SulemanBiocenter Oulu, Faculty of Biochemistry and Molecular Medicine, University of Oulu, 90014 Oulu, Finland.
Nikolaos GiannareasBiocenter Oulu, Faculty of Biochemistry and Molecular Medicine, University of Oulu, 90014 Oulu, Finland.
Song LiuState Key Laboratory of Medical Molecular Biology, Center for Bioinformatics, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, Peking Union Medical College, 100005 Beijing, China.
PRACTICAL Consortium
Teuvo L J TammelaDepartment of Urology, Tampere University Hospital and Medical School, University of Tampere, 33521 Tampere, Finland.
Anssi AuvinenUniversity of Tampere, School of Health Sciences, 33520 Tampere, Finland.
Xiaoyue WangState Key Laboratory of Medical Molecular Biology, Center for Bioinformatics, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, Peking Union Medical College, 100005 Beijing, China.
Qilai HuangSchool of Life Science, Shandong University, 250012 Jinan, China.
Liguo WangDivision of Biomedical Statistics and Informatics, Mayo Clinic College of Medicine, Rochester, MN 55905, USA.
Aki ManninenBiocenter Oulu, Faculty of Biochemistry and Molecular Medicine, University of Oulu, 90014 Oulu, Finland.
Markku H VaaralaOulu University Hospital, 90014 Oulu, Finland; Medical Research Center Oulu, University of Oulu and Oulu University Hospital, 90014 Oulu, Finland.
Liang WangDepartment of Pathology, MCW Cancer Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Johanna SchleutkerInstitute of Biomedicine, University of Turku, 20014 Turku, Finland; Medical Genetics, Division of Laboratory, Turku University Hospital, 20521 Turku, Finland.
Gong-Hong WeiBiocenter Oulu, Faculty of Biochemistry and Molecular Medicine, University of Oulu, 90014 Oulu, Finland. Electronic address: gonghong.wei@oulu.fi.
University of Oulu · FIChinese Academy of Medical Sciences & Peking Union Medical College · CNMayo Clinic · USMedical College of Wisconsin · USUniversity of Turku · FIOulu University Hospital · FIShandong University · CNTampere University · FITampere University · FI

Funding

Genetic determinants of gene expression phenotypes in aggressive prostate cancerR01CA157881 · NCI · MEDICAL COLLEGE OF WISCONSIN · PI WANG, LIANG · 2011 to 2016
$2.9M
NCI NIH HHS R01 CA157881
6 · The paper itself

Abstract

Genome-wide association studies (GWAS) have identified rs11672691 at 19q13 associated with aggressive prostate cancer (PCa). Here, we independently confirmed the finding in a cohort of 2,738 PCa patients and discovered the biological mechanism underlying this association. We found an association of the aggressive PCa-associated allele G of rs11672691 with elevated transcript levels of two biologically plausible candidate genes, PCAT19 and CEACAM21, implicated in PCa cell growth and tumor progression. Mechanistically, rs11672691 resides in an enhancer element and alters the binding site of HOXA2, a novel oncogenic transcription factor with prognostic potential in PCa. Remarkably, CRISPR/Cas9-mediated single-nucleotide editing showed the direct effect of rs11672691 on PCAT19 and CEACAM21 expression and PCa cellular aggressive phenotype. Clinical data demonstrated synergistic effects of rs11672691 genotype and PCAT19/CEACAM21 gene expression on PCa prognosis. These results provide a plausible mechanism for rs11672691 associated with aggressive PCa and thus lay the ground work for translating this finding to the clinic.

Indexed as

AdultAllelesCell Line, TumorChromosomes, Human, Pair 19Cohort StudiesGene Expression Regulation, NeoplasticGene FrequencyGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHomeodomain ProteinsHumansMaleMiddle AgedPolymorphism, Single NucleotidePrognosisHomeodomain ProteinsHOXA2 protein, humanRNA, Long NoncodingRNA, Untranslatedaggressive prostate cancerallele-specific DNA-binding of transcription factorCEACAM21eQTLGWASHOXA2PCAT19risk stratificationrs11672691single cell CRISPR/Cas9-mediated editing

Identifiers

PMID30033361
PMCPMC6091222
OpenAlexW2883005025

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.