Evidence map›Paper›PMID 30033331›Full record

ArticleCurrent biology : CB2018

Pan-genome Analysis of Ancient and Modern Salmonella enterica Demonstrates Genomic Stability of the Invasive Para C Lineage for Millennia.

Zhemin Zhou, Inge Lundstrøm, Alicia Tran-Dien, Sebastián Duchêne, Nabil-Fareed Alikhan, Martin J Sergeant, Gemma Langridge, Anna K Fotakis, Satheesh Nair, Hans K Stenøien and 9 more

Open access · hybridAbstract read
In one paragraph

Article in Current biology : CB, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
12.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 93 citations in OpenAlex.

  1. Article
  2. Pathogens (Basel, Switzerland) · 2026
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  17. Whole-genome sequencing of multidrug resistanceFrontiers in public health · 2023
    Article
  18. International journal of molecular sciences · 2022
    Review
  19. EnteroBase: hierarchical clustering of 100 000s of bacterial genomes into species/subspecies and populations.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 9 institutions in 6 countries.

Zhemin ZhouWarwick Medical School, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, UK. Electronic address: zhemin.zhou@warwick.ac.uk.
Inge LundstrømCentre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Øster Voldgade 5-7, 1350 Copenhagen, Denmark.
Alicia Tran-DienUnité des Bactéries Pathogènes Entériques, Institut Pasteur, Paris, France.
Sebastián DuchêneDepartment of Biochemistry and Molecular Biology, University of Melbourne, Parkville, Victoria 3010, Australia.
Nabil-Fareed AlikhanWarwick Medical School, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, UK.
Martin J SergeantWarwick Medical School, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, UK.
Gemma LangridgeWellcome Trust Sanger Institute, Cambridge, UK.
Anna K FotakisCentre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Øster Voldgade 5-7, 1350 Copenhagen, Denmark.
Satheesh NairWellcome Trust Sanger Institute, Cambridge, UK.
Hans K StenøienNTNU University Museum, N-7491 Trondheim, Norway.
Stian S HamreDepartment of Archaeology, History, Cultural Studies and Religion, University of Bergen, Post Box 7805, 5020 Bergen, Norway.
Sherwood CasjensPathology Department, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
Axel ChristophersenNTNU University Museum, N-7491 Trondheim, Norway.
Christopher QuinceWarwick Medical School, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, UK.
Nicholas R ThomsonWellcome Trust Sanger Institute, Cambridge, UK.
François-Xavier WeillUnité des Bactéries Pathogènes Entériques, Institut Pasteur, Paris, France.
Simon Y W HoSchool of Life and Environmental Sciences; University of Sydney, Sydney NSW 2006, Australia.
M Thomas P GilbertCentre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Øster Voldgade 5-7, 1350 Copenhagen, Denmark; NTNU University Museum, N-7491 Trondheim, Norway. Electronic address: tgilbert@snm.ku.dk.
Mark AchtmanWarwick Medical School, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, UK. Electronic address: m.achtman@warwick.ac.uk.
University of Warwick · GBUniversity of Copenhagen · DKWellcome Sanger Institute · GBInstitut Pasteur · FRVitensenteret i Trondheim · NOThe University of Melbourne · AUThe University of Sydney · AUUniversity of Bergen · NOUniversity of Utah · US

Funding

DNA packaging and delivery by dsDNA virusesR01GM114817 · NIGMS · UNIVERSITY OF UTAH · PI CASJENS, SHERWOOD R. · 2014 to 2017
$1.5M
Biotechnology and Biological Sciences Research Council BB/L020319/1Biotechnology and Biological Sciences Research Council BB/L027801/1Medical Research Council MR/L015080/1Medical Research Council MR/M50161X/1NIGMS NIH HHS R01 GM114817Wellcome Trust 202792/Z/16/Z
6 · The paper itself

Abstract

Salmonella enterica serovar Paratyphi C causes enteric (paratyphoid) fever in humans. Its presentation can range from asymptomatic infections of the blood stream to gastrointestinal or urinary tract infection or even a fatal septicemia [1]. Paratyphi C is very rare in Europe and North America except for occasional travelers from South and East Asia or Africa, where the disease is more common [2, 3]. However, early 20

Indexed as

Genomic InstabilityDNA, AncientDNA, BacterialFemaleGenomic IslandsHumansNorwaySalmonella entericaTyphoid FeverDNA, AncientDNA, BacterialAncient DNAenteric fevergenomic stabilityhistorical infectionshost jumppan-genomeparatyphoid feverpopulation genomicsSalmonella entericatMRCA of bacterial pathogens

Identifiers

PMID30033331
PMCPMC6089836
OpenAlexW2804287730

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.