ArticleThe Plant journal : for cell and molecular biology2018
Natural genetic variation shapes root system responses to phytohormones in Arabidopsis.
Article in The Plant journal : for cell and molecular biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
23 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Genome-wide association studies meta-analysis uncovers NOJO and SGS3 novel genes involved in Arabidopsis thaliana primary root development and plasticity.Molecular biology reports · 2024Pooled it
- Species-specific, accession-specific, and common responses of foliar phytohormones and morphological traits to drought and herbivory.BMC plant biology · 2026Article
- GWAS reveal SUBER GENE1-mediated suberization via type one phosphatases.Nature plants · 2026Article
- Genome-Wide Association Analysis of Soybean Regeneration-Related Traits and Functional Exploration of Candidate Genes.Plants (Basel, Switzerland) · 2025Article
- A Genome-Wide Association Screen for Genes Affecting Leaf Trichome Development and Epidermal Metal Accumulation in Arabidopsis.Plant, cell & environment · 2025Article
- Combined Bulked Segregant Analysis-Sequencing and Transcriptome Analysis to Identify Candidate Genes Associated with Cold Stress inInternational journal of molecular sciences · 2025Article
- Rhizobial variation, more than plant variation, mediates plant symbiotic and fitness responses to herbicide stress.Ecology · 2024Article
- Automated imaging coupled with AI-powered analysis accelerates the assessment of plant resistance to Tetranychus urticae.Scientific reports · 2024Article
- Identification of genetics and hormonal factors involved in Quercus robur root growth regulation in different cultivation system.BMC plant biology · 2024Article
- Genetic adaptations in the population history of Arabidopsis thaliana.G3 (Bethesda, Md.) · 2023Article
- A novel motif in the 5'-UTR of an orphan gene 'Big Root Biomass' modulates root biomass in sesame.Plant biotechnology journal · 2021Article
- Single-cell transcriptome atlas and chromatin accessibility landscape reveal differentiation trajectories in the rice root.Nature communications · 2021Article
- Formation and Development of Taproots in Deciduous Tree Species.Frontiers in plant science · 2021Review
- Genetic Variability ofFrontiers in plant science · 2021Article
- In the presence of population structure: From genomics to candidate genes underlying local adaptation.Ecology and evolution · 2020Article
- AraPheno and the AraGWAS Catalog 2020: a major database update including RNA-Seq and knockout mutation data for Arabidopsis thaliana.Nucleic acids research · 2020Article
- Plant Biosystems Design for a Carbon-Neutral Bioeconomy.Biodesign research · 2020Review
- Root Growth Adaptation to Climate Change in Crops.Frontiers in plant science · 2020Review
- The platformPlant methods · 2020Article
- Identification of novel genes involved in phosphate accumulation in Lotus japonicus through Genome Wide Association mapping of root system architecture and anion content.PLoS genetics · 2019Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
4 authors.
Funding
Abstract
Plants adjust their architecture by modulating organ growth. This ability is largely dependent on phytohormones. While responses to phytohormones have been studied extensively, it remains unclear to which extent and how these responses are modulated in non-reference strains. Here, we assess variation of root traits upon treatment with auxin, cytokinin and abscisic acid (ABA) in 192 Arabidopsis accessions. We identify common response patterns, uncover the extent of their modulation by specific genotypes, and find that the Col-0 reference accession is not a good representative of the species in this regard. We conduct genome-wide association studies and identify 114 significant associations, most of them relating to ABA treatment. The numerous ABA candidate genes are not enriched for known ABA-associated genes, indicating that we largely uncovered unknown players. Overall, our study provides a comprehensive view of the diversity of hormone responses in the Arabidopsis thaliana species, and shows that variation of genes that are yet mostly not associated with such a role to determine natural variation of the response to phytohormones.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.