Evidence map›Paper›PMID 30030471›Full record

ArticleScientific reports2018

Intact glycosphingolipidomic analysis of the cell membrane during differentiation yields extensive glycan and lipid changes.

Maurice Wong, Gege Xu, Dayoung Park, Mariana Barboza, Carlito B Lebrilla

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 20 citations in OpenAlex.

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  4. Modulation ofFrontiers in cellular and infection microbiology · 2024
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Maurice WongDepartment of Chemistry, University of California, Davis, 1 Shields Ave., Davis, California, 95616, USA.ORCID http://orcid.org/0000-0003-3851-2928
Gege XuDepartment of Chemistry, University of California, Davis, 1 Shields Ave., Davis, California, 95616, USA.
Dayoung ParkDepartment of Chemistry, University of California, Davis, 1 Shields Ave., Davis, California, 95616, USA.ORCID http://orcid.org/0000-0003-4983-4340
Mariana BarbozaDepartment of Chemistry, University of California, Davis, 1 Shields Ave., Davis, California, 95616, USA.
Carlito B LebrillaDepartment of Chemistry, University of California, Davis, 1 Shields Ave., Davis, California, 95616, USA. cblebrilla@ucdavis.edu.ORCID http://orcid.org/0000-0001-7190-5323
University of California, Davis · US

Funding

The incorporation of human milk oligosaccharides in brain glycoconjugatesR01GM049077 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI LEBRILLA, CARLITO B · 1999 to 2024
$6.3M
NIGMS NIH HHS R01 GM049077U.S. Department of Health & Human Services | National Institutes of Health (NIH) 2R01GM049077
6 · The paper itself

Abstract

Glycosphingolipids (GSLs) are found in cellular membranes of most organisms and play important roles in cell-cell recognition, signaling, growth, and adhesion, among others. A method based on nanoflow high performance liquid chromatography-chip-quadrupole-time-of-flight mass spectrometry (nanoHPLC Chip-Q-TOF MS) was applied towards identifying and quantifying intact GSLs from a variety of samples, including cultured cell lines and animal tissue. The method provides the composition and sequence of the glycan, as well as variations in the ceramide portion of the GSL. It was used to profile the changes in the glycolipidome of Caco-2 cells as they undergo differentiation. A total of 226 unique GSLs were found among Caco-2 samples from five differentiation time-points. The method provided a comprehensive glycolipidomic profile of a cell during differentiation to yield the dynamic variation of intact GSL structures.

Indexed as

Cell DifferentiationLipid MetabolismAnimalsCaco-2 CellsCell Line, TumorCell MembraneChromatography, High Pressure LiquidGlycosphingolipidsHumansMass SpectrometryPolysaccharidesTime FactorsGlycosphingolipidsPolysaccharides

Identifiers

PMID30030471
PMCPMC6054638
OpenAlexW2884378254

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.