Evidence map›Paper›PMID 30030455›Full record

ArticleScientific reports2018

Intestinal crypts recover rapidly from focal damage with coordinated motion of stem cells that is impaired by aging.

Jiahn Choi, Nikolai Rakhilin, Poornima Gadamsetty, Daniel J Joe, Tahmineh Tabrizian, Steven M Lipkin, Derek M Huffman, Xiling Shen, Nozomi Nishimura

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.2field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Imaging the enteric nervous system.Frontiers in neuroanatomy · 2025
    Review
  7. Review
  8. Review
  9. Review
  10. Review
  11. American journal of physiology. Gastrointestinal and liver physiology · 2023
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Capturing Stem Cell Behavior Using Intravital and Live Cell Microscopy.Cold Spring Harbor perspectives in biology · 2020
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Jiahn ChoiNancy E. and Peter C. Meinig School of Biomedical Engineering, Cornell University, Ithaca, 14853, USA.
Nikolai RakhilinDepartment of Biomedical Engineering, Duke University, Durham, North Carolina, 27708, USA.
Poornima GadamsettyNancy E. and Peter C. Meinig School of Biomedical Engineering, Cornell University, Ithaca, 14853, USA.
Daniel J JoeNancy E. and Peter C. Meinig School of Biomedical Engineering, Cornell University, Ithaca, 14853, USA.
Tahmineh TabrizianMolecular Pharmacology and Medicine, Albert Einstein College of Medicine, Bronx, New York, 10461, USA.
Steven M LipkinDepartments of Medicine and Genetic Medicine, Weill Cornell College of Medicine, New York, 10021, USA.
Derek M HuffmanMolecular Pharmacology and Medicine, Albert Einstein College of Medicine, Bronx, New York, 10461, USA.
Xiling ShenDepartment of Biomedical Engineering, Duke University, Durham, North Carolina, 27708, USA.ORCID http://orcid.org/0000-0002-4978-3531
Nozomi NishimuraNancy E. and Peter C. Meinig School of Biomedical Engineering, Cornell University, Ithaca, 14853, USA. nn62@cornell.edu.
Cornell University · USAlbert Einstein College of Medicine · USDuke University · US

Funding

Einstein's Nathan Shock Center of Excellence in Basic Biology of AgingP30AG038072 · NIA · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI HUFFMAN, DEREK MAJOR · 2010 to 2024
$10.8M
Robustness of the Intestinal Stem Cell NicheR01GM114254 · NIGMS · DUKE UNIVERSITY · PI SHEN, XILING · 2015 to 2017
$918k
Cell autonomous versus non-cell autonomous aging in intestinal decline and tumorigenesisR21AG055026 · NIA · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI HUFFMAN, DEREK MAJOR · 2017 to 2018
$459k
TNF alpha and IL-1 beta as pro-geronic factors in intestinal agingR56AG052981 · NIA · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI HUFFMAN, DEREK MAJOR · 2016 to 2016
$459k
NIA NIH HHS P30 AG038072NIA NIH HHS R21 AG055026NIA NIH HHS R56 AG052981NIGMS NIH HHS R01 GM114254
6 · The paper itself

Abstract

Despite the continuous renewal and turnover of the small intestinal epithelium, the intestinal crypt maintains a 'soccer ball-like', alternating pattern of stem and Paneth cells at the base of the crypt. To study the robustness of the alternating pattern, we used intravital two-photon microscopy in mice with fluorescently-labeled Lgr5+ intestinal stem cells and precisely perturbed the mosaic pattern with femtosecond laser ablation. Ablation of one to three cells initiated rapid motion of crypt cells that restored the alternation in the pattern within about two hours with only the rearrangement of pre-existing cells, without any cell division. Crypt cells then performed a coordinated dilation of the crypt lumen, which resulted in peristalsis-like motion that forced damaged cells out of the crypt. Crypt cell motion was reduced with inhibition of the ROCK pathway and attenuated with old age, and both resulted in incomplete pattern recovery. This suggests that in addition to proliferation and self-renewal, motility of stem cells is critical for maintaining homeostasis. Reduction of this newly-identified behavior of stem cells could contribute to disease and age-related changes.

Indexed as

AgingAnimalsCell MovementHomeostasisIntestinal MucosaIntravital MicroscopyLaser TherapyMicePeristalsisStem Cells

Identifiers

PMID30030455
PMCPMC6054609
OpenAlexW2949337103

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.