Evidence map›Paper›PMID 30029674›Full record

ArticleArthritis research & therapy2018

Functional intraepithelial lymphocyte changes in inflammatory bowel disease and spondyloarthritis have disease specific correlations with intestinal microbiota.

Emilie H Regner, Neha Ohri, Andrew Stahly, Mark E Gerich, Blair P Fennimore, Diana Ir, Widian K Jubair, Carsten Görg, Janet Siebert, Charles E Robertson and 3 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in Arthritis research & therapy, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02389075 (The Colonic Microbiome and Mucosal Immunity in Inflammatory Bowel Disease and Ankylosing Spondylitis), which is not on this map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02389075 active not recruitingnot on this map

The Colonic Microbiome and Mucosal Immunity in Inflammatory Bowel Disease and Ankylosing Spondylitis

TypeobservationalSponsorUniversity of Colorado, DenverRan2015 to 2026Enrolled129ConditionsInflammatory Bowel Diseases (IBD), Ankylosing Spondylitis (AS)ArmsPinch biopsies, Flexible sigmoidoscopy
3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 51 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
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  9. Article
  10. Review
  11. Review
  12. Frontiers in nutrition · 2023
    Article
  13. Biomolecular Mechanisms of Autoimmune Diseases and Their Relationship with the Resident Microbiota: Friend or Foe?Pathophysiology : the official journal of the International Society for Pathophysiology · 2022
    Review
  14. Article
  15. Article
  16. Review
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  19. Crohn's disease.Nature reviews. Disease primers · 2020
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Emilie H RegnerDivision of Gastroenterology, Department of Medicine, University of Colorado School of Medicine, Aurora, CO, USA.
Neha OhriDivision of Rheumatology, Department of Medicine, University of Colorado School of Medicine, Aurora, CO, USA.
Andrew StahlyDivision of Rheumatology, Department of Medicine, University of Colorado School of Medicine, Aurora, CO, USA.
Mark E GerichDivision of Gastroenterology, Department of Medicine, University of Colorado School of Medicine, Aurora, CO, USA.
Blair P FennimoreDivision of Gastroenterology, Department of Medicine, University of Colorado School of Medicine, Aurora, CO, USA.
Diana IrDivision of Infectious Disease, Department of Medicine, University of Colorado School of Medicine, Aurora, CO, USA.
Widian K JubairDivision of Rheumatology, Department of Medicine, University of Colorado School of Medicine, Aurora, CO, USA.
Carsten GörgComputational Bioscience Program, University of Colorado School of Medicine, Aurora, CO, USA.
Janet SiebertComputational Bioscience Program, University of Colorado School of Medicine, Aurora, CO, USA.
Charles E RobertsonDivision of Infectious Disease, Department of Medicine, University of Colorado School of Medicine, Aurora, CO, USA.
Liron CaplanDivision of Rheumatology, Department of Medicine, University of Colorado School of Medicine, Aurora, CO, USA.
Daniel N FrankDivision of Infectious Disease, Department of Medicine, University of Colorado School of Medicine, Aurora, CO, USA.
Kristine A KuhnDivision of Rheumatology, Department of Medicine, University of Colorado School of Medicine, Aurora, CO, USA. kristine.kuhn@ucdenver.edu.ORCID 0000-0002-6900-4195
University of Colorado Denver · USDenver VA Medical Center · US

Funding

Colorado Clinical and Translational Sciences InstituteUL1TR001082 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2013 to 2017
$48.0M
PILOT STUDY--SUBSTRATE METABOLISM IN EXTREMELY LOW BIRTH WEIGHT INFANTSP30DK048520 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI Edward L Melanson · 1995 to 2026
$32.6M
Computational Bioscience Program Training GrantT15LM009451 · NLM · UNIVERSITY OF COLORADO DENVER · PI Katherina Kechris-Mays, Arjun Krishnan · 2007 to 2026
$11.7M
Prevention Center U01: Early Targets for Antigen-Specific Tolerance Induction in Preclinical Rheumatoid ArthritisU01AI101981 · NIAID · UNIVERSITY OF COLORADO DENVER · PI HOLERS, VERNON MICHAEL · 2012 to 2021
$6.2M
Research Training in Rheumatology INCLUDE Down Syndrome SupplementT32AR007534 · NIAMS · UNIVERSITY OF COLORADO DENVER · PI Kristine A. Kuhn · 1986 to 2026
$6.1M
Development of colonic intraepithelial lymphocytes and their role in epithelial and immune functionK08DK107905 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI KUHN, KRISTINE A. · 2016 to 2020
$716k
NCATS NIH HHS UL1 TR001082NIAID NIH HHS U01 AI101981NIAMS NIH HHS T32 AR007534NIDDK NIH HHS K08 DK107905NLM NIH HHS T15 LM009451
6 · The paper itself

Abstract

backgroundDysbiosis occurs in spondyloarthritis (SpA) and inflammatory bowel disease (IBD), which is subdivided into Crohn's disease (CD) and ulcerative colitis (UC). The immunologic consequences of alterations in microbiota, however, have not been defined. Intraepithelial lymphocytes (IELs) are T cells within the intestinal epithelium that are in close contact with bacteria and are likely to be modulated by changes in microbiota. We examined differences in human gut-associated bacteria and tested correlation with functional changes in IELs in patients with axial SpA (axSpA), CD, or UC, and in controls.

methodsWe conducted a case-control study to evaluate IELs from pinch biopsies of grossly normal colonic tissue from subjects with biopsy-proven CD or UC, axSpA fulfilling Assessment of SpondyloArthritis International Society (ASAS) criteria and from controls during endoscopy. IELs were harvested and characterized by flow cytometry for cell surface markers. Secreted cytokines were measured by ELISA. Microbiome analysis was by 16S rRNA gene sequencing from rectal swabs. Statistical analyses were performed with the Kruskal-Wallis and Spearman's rank tests.

resultsThe total number of IELs was significantly decreased in subjects with axSpA compared to those with IBD and controls, likely due to a decrease in TCRβ+ IELs. We found strong, significant negative correlation between peripheral lymphocyte count and IEL number. IELs secreted significantly increased IL-1β in patients with UC, significantly increased IL-17A and IFN-γ in patients with CD, and significantly increased TNF-α in patients with CD and axSpA as compared to other cohorts. For each disease subtype, IELs and IEL-produced cytokines were positively and negatively correlated with the relative abundance of multiple bacterial taxa.

conclusionsOur data indicate differences in IEL function among subjects with axSpA, CD, and UC compared to healthy controls. We propose that the observed correlation between altered microbiota and IEL function in these populations are relevant to the pathogenesis of axSpA and IBD, and discuss possible mechanisms.

trial registrationClinicalTrials.gov, NCT02389075 . Registered on 17 March 2015.

Indexed as

AdultCase-Control StudiesFemaleGastrointestinal MicrobiomeHumansInflammatory Bowel DiseasesIntraepithelial LymphocytesMaleMiddle AgedSpondylarthritisCrohn’s diseaseInflammatory bowel diseaseIntraepithelial lymphocytesMicrobiomeSpondyloarthritisUlcerative colitis

Identifiers

PMID30029674
PMCPMC6053728
OpenAlexW2883846150

What OpenQuestion holds

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LicenceCC BY
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.