Evidence map›Paper›PMID 30029012›Full record

ArticleVirology2018

Detailed mapping of the linear B Cell epitopes of the hemagglutinin (HA) protein of swine influenza virus.

Zhao Wang, Bing Huang, Milton Thomas, Chithra C Sreenivasan, Zizhang Sheng, Jieshi Yu, Ben M Hause, Dan Wang, David H Francis, Radhey S Kaushik and 1 more

Open access · greenAbstract read
In one paragraph

Article in Virology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Zhao WangDepartment of Biology and Microbiology, South Dakota State University, Brookings, SD 57007, USA.
Bing HuangDepartment of Biology and Microbiology, South Dakota State University, Brookings, SD 57007, USA; Poultry Research Institute, Shandong Academy of Agricultural Sciences, Jinan, Shandong, China.
Milton ThomasDepartment of Biology and Microbiology, South Dakota State University, Brookings, SD 57007, USA.
Chithra C SreenivasanDepartment of Biology and Microbiology, South Dakota State University, Brookings, SD 57007, USA.
Zizhang ShengDepartment of Biochemistry and Molecular Biophysics, Columbia University, New York, NY, USA.
Jieshi YuDepartment of Biology and Microbiology, South Dakota State University, Brookings, SD 57007, USA.
Ben M HauseCambridge Technologies, Oxford Street Worthington, MN 56187, USA.
Dan WangDepartment of Biology and Microbiology, South Dakota State University, Brookings, SD 57007, USA; BioSNTR, Brookings, SD 57007, USA.
David H FrancisDepartment of Veterinary and Biomedical Sciences, South Dakota State University, Brookings, SD 57007, USA.
Radhey S KaushikDepartment of Biology and Microbiology, South Dakota State University, Brookings, SD 57007, USA. Electronic address: radhey.kaushik@sdstate.edu.
Feng LiDepartment of Biology and Microbiology, South Dakota State University, Brookings, SD 57007, USA; BioSNTR, Brookings, SD 57007, USA. Electronic address: feng.li@sdstate.edu.
South Dakota State University · USColumbia University · US

Funding

Multiple Chronic Conditions_Interdisciplinary Nurse Scientist TrainingT32NR015433 · NINR · CASE WESTERN RESERVE UNIVERSITY · PI MOORE, SHIRLEY M · 2015 to 2019
$1.9M
Stimulation of broadly neutralizing antibodies against influenza in a pig modelR15AI089690 · NIAID · SOUTH DAKOTA STATE UNIVERSITY · PI FRANCIS, DAVID HULET, KAUSHIK, RADHEY SHYAM · 2011 to 2011
$424k
NIAID NIH HHS R15 AI089690NINR NIH HHS T32 NR015433
6 · The paper itself

Abstract

Using the Hemagglutinin (HA) protein peptide array of H1N1 pdm09 and a panel of swine antisera against various swine influenza H1 and H3 clusters, we identified three immunoreactive epitopes with one (peptide 15) located in HA1 (amino acids 57-71) and two (peptides 121 and 139) in HA2 (amino acids 481-495 and 553-566). Further analysis showed that all swine antisera of H1 clusters efficiently recognized two HA2 epitopes; peptides 121 and 139, with only a subset of antisera reactive to HA1-derived peptide 15. Interestingly, none of these peptides were reactive to SIV H3 antisera. Finally, intranasal inoculation of peptides 15 and 121 into pigs revealed that peptide 121, not peptide 15, was able to generate antibody responses in some animals. The results of our experiments provide an important foundation for further analyzing the immune response against these peptides during natural viral infection and also provide peptide substrates for diagnostic assays.

Indexed as

Epitope MappingAnimalsAntibodies, ViralEpitopes, B-LymphocyteHemagglutinin Glycoproteins, Influenza VirusInfluenza A Virus, H1N1 SubtypeOrthomyxoviridae InfectionsSwineSwine DiseasesAntibodies, ViralEpitopes, B-LymphocyteH1N1 virus hemagglutininHemagglutinin Glycoproteins, Influenza VirusB cell epitopeH1 subtypeH3 subtypeHemagglutinin (HA) ProteinPeptideSwine influenza

Identifiers

PMID30029012
PMCPMC6092940
OpenAlexW2885015361

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.