Evidence map›Paper›PMID 30024965›Full record

ArticlePloS one2018

Multi-locus sequence typing of Treponema pallidum subsp. pallidum present in clinical samples from France: Infecting treponemes are genetically diverse and belong to 18 allelic profiles.

Petra Pospíšilová, Philippe Alain Grange, Linda Grillová, Lenka Mikalová, Pervenche Martinet, Michel Janier, Annie Vermersch, Nadjet Benhaddou, Pascal Del Giudice, Isabelle Alcaraz and 3 more

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Proteome Analysis of SevenJournal of proteome research · 2025
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  2. Analysis ofmSphere · 2025
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  3. Article
  4. Sexually TransmittedOpen forum infectious diseases · 2025
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  5. Article
  6. Article
  7. Molecular investigation ofMicrobiology spectrum · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Treponema pallidum SubspeciesMicrobiology spectrum · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Petra PospíšilováDepartment of Biology, Faculty of Medicine, Masaryk University, Brno, Czech Republic.
Philippe Alain GrangeInstitut Cochin U1016 Equipe Batteux, Laboratoire de Dermatologie-CNR Syphilis, Faculté de Médecine, Université Sorbonne Paris Descartes, Paris, France.
Linda GrillováDepartment of Biology, Faculty of Medicine, Masaryk University, Brno, Czech Republic.
Lenka MikalováDepartment of Biology, Faculty of Medicine, Masaryk University, Brno, Czech Republic.
Pervenche MartinetService Prévention Santé Conseil Départemental des Bouches du Rhône, Marseille, France.
Michel JanierCentre des MST, Hôpital Saint-Louis, AP-HP, Paris, France.
Annie VermerschService de Dermatologie, Hôpital Jean Bernard, Valenciennes, France.
Nadjet BenhaddouInstitut Cochin U1016 Equipe Batteux, Laboratoire de Dermatologie-CNR Syphilis, Faculté de Médecine, Université Sorbonne Paris Descartes, Paris, France.
Pascal Del GiudiceService de Dermatologie-Infectiologie, Centre Hospitalier Inter régional, Fréjus, France.
Isabelle AlcarazService Universitaire des Maladies Infectieuses et du Voyageur, Hôpital Dron, Tourcoing, France.
François TruchetetService de Dermatologie, Hôpital Bel Air, Metz-Thionville, France.
Nicolas DupinInstitut Cochin U1016 Equipe Batteux, Laboratoire de Dermatologie-CNR Syphilis, Faculté de Médecine, Université Sorbonne Paris Descartes, Paris, France.ORCID 0000-0002-6237-4951
David ŠmajsDepartment of Biology, Faculty of Medicine, Masaryk University, Brno, Czech Republic.ORCID 0000-0002-4176-3464

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Treponema pallidum subsp. pallidum, the causative agent of sexually transmitted syphilis, detected in clinical samples from France, was subjected to molecular typing using the recently developed Multilocus Sequence Typing system. The samples (n = 133) used in this study were collected from 2010-2016 from patients with diagnosed primary or secondary syphilis attending outpatient centers or hospitals in several locations in France. Altogether, 18 different allelic profiles were found among the fully typed samples (n = 112). There were five allelic variants identified for TP0136, 12 for TP0548, and eight for TP0705. Out of the identified alleles, one, seven, and three novel alleles were identified in TP0136, TP0548, and TP0705, respectively. Partial allelic profiles were obtained from 6 samples. The majority of samples (n = 110) belonged to the SS14-like cluster of TPA isolates while 7 clustered with Nichols-like isolates. Patients infected with Nichols-like samples were more often older (p = 0.041) and more often diagnosed with secondary syphilis (p = 0.033) compared to patients infected with SS14-like samples. In addition, macrolide resistance caused by the A2058G mutation was found to be associated with allelic profile 1.3.1 or with strains belonging to the 1.3.1 lineage (p<0.001). The genetic diversity among TPA strains infecting the European population was surprisingly high, which suggests that additional studies are needed to reveal the full genetic diversity of TPA pathogens infecting humans.

Indexed as

AdolescentAdultAgedAllelesBacterial Typing TechniquesBiodiversityChildChild, PreschoolFemaleFranceHumansInfantInfant, NewbornMaleMiddle AgedMultilocus Sequence Typing

Identifiers

PMID30024965
PMCPMC6053231

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.