Evidence map›Paper›PMID 30024290›Full record

ArticleMolecular biology of the cell2018

Compositional complexity of rods and rings.

Cara R Schiavon, Maxwell E Griffin, Marinella Pirozzi, Raman Parashuraman, Wei Zhou, H A Jinnah, Daniel Reines, Richard A Kahn

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Nuclear IMPDH Filaments in Human Gliomas.Journal of neuropathology and experimental neurology · 2021
    Article
  10. Roles for ELMOD2 and Rootletin in ciliogenesis.Molecular biology of the cell · 2021
    Article
  11. Enzymatic Noncovalent Synthesis.Chemical reviews · 2020
    Review
  12. Article
  13. Freedom of assembly: metabolic enzymes come together.Molecular biology of the cell · 2020
    Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Cara R SchiavonCancer Biology Graduate Program, Graduate Division of Biomedical and Biological Sciences, Laney Graduate School, Atlanta, GA 30307.
Maxwell E GriffinCancer Biology Graduate Program, Graduate Division of Biomedical and Biological Sciences, Laney Graduate School, Atlanta, GA 30307.
Marinella PirozziEuroBioImaging Facility, Institute of Protein Biochemistry, 80131 Naples, Italy.
Raman ParashuramanEuroBioImaging Facility, Institute of Protein Biochemistry, 80131 Naples, Italy.
Wei ZhouDepartment of Hematology and Medical Oncology, Emory University School of Medicine, Atlanta, GA 30322.
H A JinnahDepartment of Neurology and Human Genetics, Emory University School of Medicine, Atlanta, GA 30322.
Daniel ReinesDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322.
Richard A KahnDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322.
Emory University · USGraduate School USA · USInstitute of Protein Biochemistry · IT

Funding

ENNCF - Viral Vector CoreP30NS055077 · NINDS · EMORY UNIVERSITY · PI LEVEY, ALLAN I · 2008 to 2018
$6.8M
Molecular mechanisms of ARF family GTPasesR35GM122568 · NIGMS · EMORY UNIVERSITY · PI KAHN, RICHARD A · 2017 to 2024
$3.7M
The Regulation and Cellular Activities of the ARL2 GTPaseR01GM090158 · NIGMS · EMORY UNIVERSITY · PI KAHN, RICHARD A · 2010 to 2017
$2.5M
Biochemical & Genetic Analysis of Low Complexity Domains in RNA-binding protein biologyR01GM120271 · NIGMS · EMORY UNIVERSITY · PI REINES, DANIEL · 2016 to 2019
$1.3M
Human Induced Pluripotent Stem Cells As Models for Inherited Developmental DisordersR56NS102980 · NINDS · EMORY UNIVERSITY · PI JINNAH, HYDER A · 2017 to 2017
$546k
NIGMS NIH HHS R01 GM090158NIGMS NIH HHS R01 GM120271NIGMS NIH HHS R35 GM122568NINDS NIH HHS P30 NS055077NINDS NIH HHS R56 NS102980
6 · The paper itself

Abstract

Rods and rings (RRs) are large linear- or circular-shaped structures typically described as polymers of IMPDH (inosine monophosphate dehydrogenase). They have been observed across a wide variety of cell types and species and can be induced to form by inhibitors of IMPDH. RRs are thought to play a role in the regulation of de novo guanine nucleotide synthesis; however, the function and regulation of RRs is poorly understood. Here we show that the regulatory GTPase, ARL2, a subset of its binding partners, and several resident proteins at the endoplasmic reticulum (ER) also localize to RRs. We also have identified two new inducers of RR formation: AICAR and glucose deprivation. We demonstrate that RRs can be disassembled if guanine nucleotides can be generated by salvage synthesis regardless of the inducer. Finally, we show that there is an ordered addition of components as RRs mature, with IMPDH first forming aggregates, followed by ARL2, and only later calnexin, a marker of the ER. These findings suggest that RRs are considerably more complex than previously thought and that the function(s) of RRs may include involvement of a regulatory GTPase, its effectors, and potentially contacts with intracellular membranes.

Indexed as

Aminoimidazole CarboxamideAnimalsCarbon-Nitrogen LigasesCell LineEndoplasmic ReticulumFibroblastsGlucoseGTP-Binding ProteinsGuanosineHumansIMP DehydrogenaseIntracellular MembranesKineticsLesch-Nyhan SyndromeMiceMycophenolic AcidAICA ribonucleotideAminoimidazole CarboxamideARL2 protein, humanCarbon-Nitrogen LigasesCTP synthetaseGlucoseGTP-Binding ProteinsGuanosineIMP DehydrogenaseMycophenolic AcidRibonucleotides

Identifiers

PMID30024290
PMCPMC6249804
OpenAlexW2884015510

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.