Evidence map›Paper›PMID 30022317›Full record

ArticleBrain informatics2018

Thought Chart: tracking the thought with manifold learning during emotion regulation.

Mengqi Xing, Johnson GadElkarim, Olusola Ajilore, Ouri Wolfson, Angus Forbes, K Luan Phan, Heide Klumpp, Alex Leow

Abstract read
In one paragraph

Article in Brain informatics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Mengqi XingDepartment of Bioengineering, University of Illinois at Chicago, Chicago, IL, USA.
Johnson GadElkarimDepartment of Computer Science, University of Illinois at Chicago, Chicago, IL, USA.
Olusola AjiloreDepartment of Psychiatry, University of Illinois at Chicago, Chicago, IL, USA.
Ouri WolfsonDepartment of Computer Science, University of Illinois at Chicago, Chicago, IL, USA.
Angus ForbesDepartment of Computer Science, University of Illinois at Chicago, Chicago, IL, USA.
K Luan PhanDepartment of Psychiatry, University of Illinois at Chicago, Chicago, IL, USA.
Heide KlumppDepartment of Psychiatry, University of Illinois at Chicago, Chicago, IL, USA.
Alex LeowDepartment of Psychiatry, Department of Bioengineering, University of Illinois at Chicago, Chicago, IL, USA. aleow@psych.uic.edu.

Funding

Strengthening Stakeholder Engagement in Human Research Protections.UL1TR002003 · NCATS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI KARNIK, NIRANJAN SUBHASH, MERMELSTEIN, ROBIN J. · 2016 to 2024
$33.7M
CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR029879 · NCRR · UNIVERSITY OF ILLINOIS AT CHICAGO · PI MAZZONE, THEODORE · 2009 to 2011
$11.0M
Negative Valence Brain Targets and Predictors of Anxiety and Depression TreatmentR01MH101497 · NIMH · UNIVERSITY OF ILLINOIS AT CHICAGO · PI PHAN, K. LUAN · 2013 to 2016
$2.6M
Brain Mechanisms of Cognitive Behavioral Therapy for Social Anxiety DisorderK23MH093679 · NIMH · UNIVERSITY OF ILLINOIS AT CHICAGO · PI KLUMPP, HEIDE · 2012 to 2016
$948k
Center for Clinical and Translational Research UL1RR029879NCATS NIH HHS UL1 TR002003NCRR NIH HHS UL1 RR029879NIMH NIH HHS K23 MH093679NIMH NIH HHS K23MH093679 (HK)NIMH NIH HHS R01 MH101497NIMH NIH HHS R01MH101497 (KLP)
6 · The paper itself

Abstract

The Nash embedding theorem demonstrates that any compact manifold can be isometrically embedded in a Euclidean space. Assuming the complex brain states form a high-dimensional manifold in a topological space, we propose a manifold learning framework, termed Thought Chart, to reconstruct and visualize the manifold in a low-dimensional space. Furthermore, it serves as a data-driven approach to discover the underlying dynamics when the brain is engaged in a series of emotion and cognitive regulation tasks. EEG-based temporal dynamic functional connectomes are created based on 20 psychiatrically healthy participants' EEG recordings during resting state and an emotion regulation task. Graph dissimilarity space embedding was applied to all the dynamic EEG connectomes. In order to visualize the learned manifold in a lower dimensional space, local neighborhood information is reconstructed via k-nearest neighbor-based nonlinear dimensionality reduction (NDR) and epsilon distance-based NDR. We showed that two neighborhood constructing approaches of NDR embed the manifold in a two-dimensional space, which we named Thought Chart. In Thought Chart, different task conditions represent distinct trajectories. Properties such as the distribution or average length in the 2-D space may serve as useful parameters to explore the underlying cognitive load and emotion processing during the complex task. In sum, this framework is a novel data-driven approach to the learning and visualization of underlying neurophysiological dynamics of complex functional brain data.

Indexed as

EEG connectomeEmotion regulationManifold learningNearest neighborNonlinear dimensionality reductionThought Chart

Identifiers

PMID30022317
PMCPMC6170936

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.