Evidence map›Paper›PMID 30021109›Full record

ArticleBiophysical journal2018

Monitoring Unfolding of Titin I27 Single and Bi Domain with High-Pressure NMR Spectroscopy.

Isaline Herrada, Philippe Barthe, Marisa Vanheusden, Karine DeGuillen, Léa Mammri, Stéphane Delbecq, Felix Rico, Christian Roumestand

Abstract read
In one paragraph

Article in Biophysical journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Isaline HerradaCentre de Biochimie Structurale, Université de Montpellier, CNRS, INSERM, Montpellier, France.
Philippe BartheCentre de Biochimie Structurale, Université de Montpellier, CNRS, INSERM, Montpellier, France.
Marisa VanheusdenCentre de Biochimie Structurale, Université de Montpellier, CNRS, INSERM, Montpellier, France.
Karine DeGuillenCentre de Biochimie Structurale, Université de Montpellier, CNRS, INSERM, Montpellier, France.
Léa MammriCentre de Biochimie Structurale, Université de Montpellier, CNRS, INSERM, Montpellier, France.
Stéphane DelbecqVaccination Antiparasitaire, Université de Montpellier, Montpellier, France.
Felix RicoUniversité Aix-Marseille, INSERM, CNRS, Marseille, France.
Christian RoumestandCentre de Biochimie Structurale, Université de Montpellier, CNRS, INSERM, Montpellier, France. Electronic address: christian.roumestand@cbs.cnrs.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A complete description of the pathways and mechanisms of protein folding requires a detailed structural and energetic characterization of the folding energy landscape. Simulations, when corroborated by experimental data yielding global information on the folding process, can provide this level of insight. Molecular dynamics (MD) has often been combined with force spectroscopy experiments to decipher the unfolding mechanism of titin immunoglobulin-like single or multidomain, the giant multimodular protein from sarcomeres, yielding information on the sequential events during titin unfolding under stretching. Here, we used high-pressure NMR to monitor the unfolding of titin I27 Ig-like single domain and tandem. Because this method brings residue-specific information on the folding process, it can provide quasiatomic details on this process without the help of MD simulations. Globally, the results of our high-pressure analysis are in agreement with previous results obtained by the combination of experimental measurements and MD simulation and/or protein engineering, although the intermediate folding state caused by the early detachment of the AB β-sheet, often reported in previous works based on MD or force spectroscopy, cannot be detected. On the other hand, the A'G parallel β-sheet of the β-sandwich has been confirmed as the Achilles heel of the three-dimensional scaffold: its disruption yields complete unfolding with very similar characteristics (free energy, unfolding volume, kinetics rate constants) for the two constructs.

Indexed as

Nuclear Magnetic Resonance, BiomolecularPressureProtein UnfoldingConnectinKineticsMolecular Dynamics SimulationProtein DomainsConnectin

Identifiers

PMID30021109
PMCPMC6051020

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.