Evidence map›Paper›PMID 30020927›Full record

ArticlePloS one2018

DNA barcoding Brooklyn (New York): A first assessment of biodiversity in Marine Park by citizen scientists.

Christine Marizzi, Antonia Florio, Melissa Lee, Mohammed Khalfan, Cornel Ghiban, Bruce Nash, Jenna Dorey, Sean McKenzie, Christine Mazza, Fabiana Cellini and 30 more

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
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  5. Article
  6. Article
  7. Article
  8. A Rapid, Equipment-Free DNA Isolation Method for DNA Barcoding.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. The Potential Role of School Citizen Science Programs in Infectious Disease Surveillance: A Critical Review.International journal of environmental research and public health · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

40 authors.

Christine MarizziDNA Learning Center, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States of America.ORCID 0000-0001-9065-3352
Antonia FlorioDepartment of Herpetology, American Museum of Natural History, New York, New York, United States of America.
Melissa LeeDNA Learning Center, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States of America.
Mohammed KhalfanNew York University, New York, New York, United States of America.
Cornel GhibanDNA Learning Center, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States of America.
Bruce NashDNA Learning Center, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States of America.
Jenna DoreyDNA Learning Center, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States of America.
Sean McKenzieThe Rockefeller University, New York, New York, United States of America.
Christine MazzaGenovesi Environmental Study Center, New York City Department of Education, Brooklyn, New York, United States of America.
Fabiana CelliniGenovesi Environmental Study Center, New York City Department of Education, Brooklyn, New York, United States of America.
Carlo BariaCSI for International Studies, New York City Department of Education, Staten Island, New York, United States of America.
Ron BepatHigh School for Construction Trades, Engineering and Architecture, New York City Department of Education, Queens, New York, United States of America.
Lena CosentinoCSI for International Studies, New York City Department of Education, Staten Island, New York, United States of America.
Alexander DvorakInternational High School at Union Square, New York City Department of Education New York, New York, United States of America.
Amina GacevicHigh School for Health Professions and Human Services, New York City Department of Education, New York, New York, United States of America.
Cristina Guzman-MoumtzisFrank McCourt High School, New York City Department of Education, New York, New York, United States of America.
Francesca HellerFranklin D. Roosevelt High School, New York City Department of Education, Brooklyn, New York, United States of America.
Nicholas Alexander HoltHigh School for Construction Trades, Engineering and Architecture, New York City Department of Education, Queens, New York, United States of America.
Jeffrey HorensteinStuyvesant High School, New York City Department of Education, New York, New York, United States of America.
Vincent JoralemonFrank McCourt High School, New York City Department of Education, New York, New York, United States of America.
Manveer KaurHigh School for Health Professions and Human Services, New York City Department of Education, New York, New York, United States of America.
Tanveer KaurHigh School for Health Professions and Human Services, New York City Department of Education, New York, New York, United States of America.
Armani KhanHigh School for Construction Trades, Engineering and Architecture, New York City Department of Education, Queens, New York, United States of America.
Jessica KuppanHigh School for Construction Trades, Engineering and Architecture, New York City Department of Education, Queens, New York, United States of America.
Scott LavertyCSI for International Studies, New York City Department of Education, Staten Island, New York, United States of America.
Camila LockForest Hills High School, New York City Department of Education, Queens, New York, United States of America.
Marianne PenaHigh School for Health Professions and Human Services, New York City Department of Education, New York, New York, United States of America.
Ilona PetrychynForest Hills High School, New York City Department of Education, Queens, New York, United States of America.
Indu PuthenkalamForest Hills High School, New York City Department of Education, Queens, New York, United States of America.
Daval RamHigh School for Construction Trades, Engineering and Architecture, New York City Department of Education, Queens, New York, United States of America.
Arlene RamosHigh School for Health Professions and Human Services, New York City Department of Education, New York, New York, United States of America.
Noelle ScocaBrooklyn International High School, New York City Department of Education, Brooklyn, New York, United States of America.
Rachel SinFranklin D. Roosevelt High School, New York City Department of Education, Brooklyn, New York, United States of America.
Izabel GonzalezHigh School for Health Professions and Human Services, New York City Department of Education, New York, New York, United States of America.
Akansha ThakurForest Hills High School, New York City Department of Education, Queens, New York, United States of America.
Husan UsmanovFranklin D. Roosevelt High School, New York City Department of Education, Brooklyn, New York, United States of America.
Karen HanHigh School for Construction Trades, Engineering and Architecture, New York City Department of Education, Queens, New York, United States of America.
Andy WuFranklin D. Roosevelt High School, New York City Department of Education, Brooklyn, New York, United States of America.
Tiger ZhuStuyvesant High School, New York City Department of Education, New York, New York, United States of America.
David Andrew MicklosDNA Learning Center, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States of America.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA barcoding is both an important research and science education tool. The technique allows for quick and accurate species identification using only minimal amounts of tissue samples taken from any organism at any developmental phase. DNA barcoding has many practical applications including furthering the study of taxonomy and monitoring biodiversity. In addition to these uses, DNA barcoding is a powerful tool to empower, engage, and educate students in the scientific method while conducting productive and creative research. The study presented here provides the first assessment of Marine Park (Brooklyn, New York, USA) biodiversity using DNA barcoding. New York City citizen scientists (high school students and their teachers) were trained to identify species using DNA barcoding during a two-week long institute. By performing NCBI GenBank BLAST searches, students taxonomically identified 187 samples (1 fungus, 70 animals and 116 plants) and also published 12 novel DNA barcodes on GenBank. Students also identified 7 ant species and demonstrated the potential of DNA barcoding for identification of this especially diverse group when coupled with traditional taxonomy using morphology. Here we outline how DNA barcoding allows citizen scientists to make preliminary taxonomic identifications and contribute to modern biodiversity research.

Indexed as

BiodiversityAcademies and InstitutesDatabases, Nucleic AcidDiagnostic Tests, RoutineDNADNA Barcoding, TaxonomicHumansLeukocytesNew York CityPlantsStudentsDNA

Identifiers

PMID30020927
PMCPMC6051577

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.