Evidence map›Paper›PMID 30020075›Full record

ArticleeLife2018

Noncoding RNA-nucleated heterochromatin spreading is intrinsically labile and requires accessory elements for epigenetic stability.

R A Greenstein, Stephen K Jones, Eric C Spivey, James R Rybarski, Ilya J Finkelstein, Bassem Al-Sady

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 43 citations in OpenAlex.

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  20. Spreading and epigenetic inheritance of heterochromatin require a critical density of histone H3 lysine 9 tri-methylation.Proceedings of the National Academy of Sciences of the United States of America · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

R A GreensteinDepartment of Microbiology & Immunology, George Williams Hooper Foundation, University of California San Francisco, San Francisco, United States.
Stephen K JonesDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, United States.ORCID https://orcid.org/0000-0001-8387-1917
Eric C SpiveyDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, United States.ORCID https://orcid.org/0000-0002-4080-8616
James R RybarskiDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, United States.ORCID http://orcid.org/0000-0001-9960-1161
Ilya J FinkelsteinDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, United States.ORCID http://orcid.org/0000-0002-9371-2431
Bassem Al-SadyDepartment of Microbiology & Immunology, George Williams Hooper Foundation, University of California San Francisco, San Francisco, United States.ORCID http://orcid.org/0000-0002-8996-7941
The University of Texas at Austin · USUniversity of California, San Francisco · US

Funding

Research BaseP30DK063720 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GERMAN, MICHAEL S · 2003 to 2019
$21.8M
Reconstructing dynamic epigenetic genome partitioning in single stem cellsDP2GM123484 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI AL-SADY, BASSEM · 2016 to 2020
$2.5M
High-throughput analysis of mitochondrial renewal and oxidative stress in cellular lifespan and quiescence of Schizosaccharomyces pombeF32AG053051 · NIA · UNIVERSITY OF TEXAS AT AUSTIN · PI JONES, STEPHEN KNOX · 2016 to 2018
$174k
NIA NIH HHS F32 AG053051NIDDK NIH HHS P30 DK063720NIGMS NIH HHS DP2 GM123484NIH HHS DP2GM123484NIH HHS F32 AG053051
6 · The paper itself

Abstract

The heterochromatin spreading reaction is a central contributor to the formation of gene-repressive structures, which are re-established with high positional precision, or fidelity, following replication. How the spreading reaction contributes to this fidelity is not clear. To resolve the origins of stable inheritance of repression, we probed the intrinsic character of spreading events in fission yeast using a system that quantitatively describes the spreading reaction in live single cells. We show that spreading triggered by noncoding RNA-nucleated elements is stochastic, multimodal, and fluctuates dynamically across time. This lack of stability correlates with high histone turnover. At the mating type locus, this unstable behavior is restrained by an accessory

Indexed as

Epigenesis, GeneticCell Cycle CheckpointsGenes, Mating Type, FungalHeterochromatinHistonesHydroxamic AcidsHydroxyureaInheritance PatternsMutationReproducibility of ResultsRNA, UntranslatedSchizosaccharomycesSingle-Cell AnalysisStochastic ProcessesStress, PhysiologicalTemperatureHeterochromatinHistonesHydroxamic AcidsHydroxyureaRNA, Untranslatedtrichostatin Acellular identitychromosomesepigenetic inheritanceepigenetics and environmentgene expressionheterochromatin spreadinghistone turnovermultigenerational single cell trackingS. pombe

Identifiers

PMID30020075
PMCPMC6070336
OpenAlexW2883815267

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.